Strain identifier
BacDive ID: 16658
Type strain:
Species: Syntrophus buswellii
Strain Designation: DM-2
Variant: Isotype of BacDive ID 16660 & 16662
Strain history: <- M.P. Bryant, DM-2
NCBI tax ID(s): 43774 (species)
General
@ref: 1167
BacDive-ID: 16658
DSM-Number: 102352
keywords: Bacteria, anaerobe, mesophilic
description: Syntrophus buswellii DM-2 is an anaerobe, mesophilic bacterium that was isolated from muncipal primary anaerobic digester.
NCBI tax id
- NCBI tax id: 43774
- Matching level: species
strain history
@ref | history |
---|---|
20218 | <- M.P. Bryant, DM-2 |
1167 | <- M.P. Bryant, DM-2 |
doi: 10.13145/bacdive16658.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Syntrophobacterales
- family: Syntrophaceae
- genus: Syntrophus
- species: Syntrophus buswellii
- full scientific name: Syntrophus buswellii Mountfort et al. 1984
@ref: 1167
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Syntrophobacterales
family: Syntrophaceae
genus: Syntrophus
species: Syntrophus buswellii
full scientific name: Syntrophus buswellii Mountfort et al. 1984
strain designation: DM-2
variant: Isotype of BacDive ID 16660 & 16662
type strain: yes
Morphology
colony morphology
- @ref: 1167
- incubation period: 8-14 days
Culture and growth conditions
culture medium
- @ref: 1167
- name: SYNTHROPHOMONAS MEDIUM (DSMZ Medium 212)
- growth: yes
- link: https://mediadive.dsmz.de/medium/212
- composition: Name: SYNTHROPHOMONAS MEDIUM (DSMZ Medium 212; with strain-specific modifications) Composition: Na2SO4 2.79163 g/l Na-benzoate 1.99402 g/l Na2CO3 1.49551 g/l Trypticase peptone 0.997008 g/l KH2PO4 0.498505 g/l NaCl 0.398803 g/l NH4Cl 0.398803 g/l MgCl2 x 6 H2O 0.329013 g/l Na2S x 9 H2O 0.299103 g/l L-Cysteine HCl x H2O 0.299103 g/l CaCl2 x 2 H2O 0.0498505 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498505 g/l NaOH 0.000498504 g/l Pyridoxine hydrochloride 0.000299103 g/l Thiamine-HCl x 2 H2O 0.000199402 g/l Nicotinic acid 0.000199402 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Calcium pantothenate 9.97009e-05 g/l Vitamin B12 9.97009e-05 g/l p-Aminobenzoic acid 7.97607e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l D-(+)-biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Distilled water
culture temp
- @ref: 1167
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 1167
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 1167
- sample type: muncipal primary anaerobic digester
- geographic location: Illinois, Urbana
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
- Cat1: #Engineered
- Cat2: #Biodegradation
- Cat3: #Anaerobic digestor
Safety information
risk assessment
- @ref: 1167
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 1167
culture collection no.: DSM 102352, DSM 2612A
straininfo link
- @ref: 85679
- straininfo: 405491
literature
- topic: Metabolism
- Pubmed-ID: 8867639
- title: Activation and degradation of benzoate, 3-phenylpropionate and crotonate by Syntrophus buswellii strain GA. Evidence for electron-transport phosphorylation during crotonate respiration.
- authors: Auburger G, Winter J
- journal: Appl Microbiol Biotechnol
- DOI: 10.1007/BF00178623
- year: 1996
- mesh: Bacteria, Anaerobic/enzymology/*metabolism, Benzoates/*metabolism, Benzoic Acid, Biodegradation, Environmental, Cell Membrane/chemistry, Crotonates/*metabolism, Cytochrome b Group/analysis, Cytochrome c Group/analysis, Cytoplasm/chemistry, Desulfovibrio/metabolism, Electron Transport, Models, Chemical, Phenylpropionates/*metabolism, Phosphorylation
- topic2: Enzymology
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
1167 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102352) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102352 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
85679 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID405491.1 | StrainInfo: A central database for resolving microbial strain identifiers |