Strain identifier
BacDive ID: 166089
Type strain: 
Species: Saccharospirillum correiae
Strain Designation: CPA1
Strain history: Fidalgo, C. University of Aveiro
NCBI tax ID(s): 1808867 (species)
General
@ref: 67772
BacDive-ID: 166089
keywords: 16S sequence, Bacteria
description: Saccharospirillum correiae CPA1 is a bacterium that was isolated from Surface sterilized above-ground tissues of the halophyte Halimione portulacoides.
NCBI tax id
- NCBI tax id: 1808867
- Matching level: species
strain history
- @ref: 67772
- history: Fidalgo, C. University of Aveiro
doi: 10.13145/bacdive166089.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Oceanospirillales
- family: Saccharospirillaceae
- genus: Saccharospirillum
- species: Saccharospirillum correiae
- full scientific name: Saccharospirillum correiae Fidalgo et al. 2017
@ref: 67772
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Oceanospirillales
family: Saccharospirillaceae
genus: Saccharospirillum
species: Saccharospirillum correiae
full scientific name: Saccharospirillum correiae Fidalgo et al. 2017
strain designation: CPA1
type strain: no
Culture and growth conditions
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 67772 | positive | minimum | 18 |
| 67772 | positive | optimum | 30 |
| 67772 | positive | maximum | 42.5 |
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 67772 | positive | optimum | 7.0-7.5 | |
| 67772 | positive | maximum | 11.5 | alkaliphile |
| 67772 | positive | minimum | 5.0 |
Isolation, sampling and environmental information
isolation
- @ref: 67772
- sample type: Surface sterilized above-ground tissues of the halophyte Halimione portulacoides
- sampling date: 2012
- geographic location: Aveiro, Aveiro
- country: Portugal
- origin.country: PRT
- continent: Europe
taxonmaps
- @ref: 69479
- File name: preview.99_73977.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_425;96_13218;97_16063;98_51767;99_73977&stattab=map
- Last taxonomy: Saccharospirillum correiae subclade
- 16S sequence: KY310592
- Sequence Identity:
- Total samples: 28
- soil counts: 2
- aquatic counts: 25
- animal counts: 1
Safety information
risk assessment
- @ref: 67772
- biosafety level: 1
Sequence information
16S sequences
- @ref: 67772
- description: Saccharospirillum correiae strain CPA1 16S ribosomal RNA gene, partial sequence
- accession: KY310592
- length: 1418
- database: nuccore
- NCBI tax ID: 1808867
External links
@ref: 67772
culture collection no.: UCCCB45, CECT 9131, LMG 29516
literature
- topic: Phylogeny
- Pubmed-ID: 28675353
- title: Saccharospirillum correiae sp. nov., an endophytic bacterium isolated from the halophyte Halimione portulacoides.
- authors: Fidalgo C, Rocha J, Proenca DN, Morais PV, Alves A, Henriques I
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.001914
- year: 2017
- mesh: Bacterial Typing Techniques, Base Composition, Chenopodiaceae/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, *Phylogeny, Portugal, RNA, Ribosomal, 16S/genetics, Salt-Tolerant Plants/*microbiology, Sequence Analysis, DNA, Ubiquinone/chemistry, Wetlands
- topic2: Transcriptome
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67772 | Curators of the UCCCB | https://ucccb.uc.pt/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |