Strain identifier
BacDive ID: 165985
Type strain: 
Species: Halococcus sp.
Strain history: NCIMB 767 <-- N. E. Gibbons <-- LMD 33.42.
NCBI tax ID(s): 228414 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 165985
keywords: 16S sequence, Archaea, mesophilic
description: Halococcus sp. JCM 8979 is a mesophilic archaeon of the family Halococcaceae.
NCBI tax id
- NCBI tax id: 228414
- Matching level: species
strain history
- @ref: 67770
- history: NCIMB 767 <-- N. E. Gibbons <-- LMD 33.42.
doi: 10.13145/bacdive165985.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Halobacteria
- order: Halobacteriales
- family: Halococcaceae
- genus: Halococcus
- species: Halococcus sp.
- full scientific name: Halococcus Schoop 1935 (Approved Lists 1980)
@ref: 67770
domain: Archaea
phylum: Euryarchaeota
class: Halobacteria
order: Halobacteriales
family: Halococcaceae
genus: Halococcus
species: Halococcus sp.
full scientific name: Halococcus sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Sequence information
16S sequences
- @ref: 67770
- description: Homo sapiens mRNA for KIAA0154 gene
- accession: D63876
- length: 3760
- database: ena
- NCBI tax ID: 9606
External links
@ref: 67770
culture collection no.: JCM 8979, ATCC 43102, IAM 13173, JCM 9742, NCIMB 767, VKM B-2026
straininfo link
- @ref: 114689
- straininfo: 46036
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 9828420 | Proposal of a new halobacterial genus Natrinema gen. nov., with two species Natrinema pellirubrum nom. nov. and Natrinema pallidum nom. nov. | McGenity TJ, Gemmell RT, Grant WD | Int J Syst Bacteriol | 10.1099/00207713-48-4-1187 | 1998 | DNA, Archaeal/chemistry, DNA, Ribosomal/chemistry, Genes, rRNA, Halobacteriaceae/*classification/isolation & purification/physiology, Halobacterium/*classification/isolation & purification/physiology, Halobacterium salinarum/classification/isolation & purification/physiology, Phylogeny, RNA, Ribosomal, 16S/genetics, Seawater, Sequence Analysis, DNA, Sodium Chloride/pharmacology, Species Specificity, Terminology as Topic, *Water Microbiology | Enzymology |
| Phylogeny | 10028254 | Proposal to transfer Halococcus turkmenicus, Halobacterium trapanicum JCM 9743 and strain GSL-11 to Haloterrigena turkmenica gen. nov., comb. nov. | Ventosa A, Gutierrez MC, Kamekura M, Dyall-Smith ML | Int J Syst Bacteriol | 10.1099/00207713-49-1-131 | 1999 | Base Composition, Base Sequence, DNA, Archaeal/analysis, Halobacterium/*classification, Halococcus/*classification, Lipids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/chemistry/genetics | Genetics |
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 114689 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID46036.1 |