Strain identifier

BacDive ID: 16598

Type strain: No

Species: Streptosporangium violaceochromogenes

Strain Designation: MK-78

Strain history: <- ATCC (Streptosporangium violaceochromogenes subsp. globiphilum) <- Kyowa Ferm. Ind. Co., Ltd., MK-78

NCBI tax ID(s): 46188 (species)

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General

@ref: 11352

BacDive-ID: 16598

DSM-Number: 43872

keywords: 16S sequence, Bacteria, mesophilic, antibiotic compound production

description: Streptosporangium violaceochromogenes MK-78 is a mesophilic bacterium that produces antibiotic compounds and was isolated from soil.

NCBI tax id

  • NCBI tax id: 46188
  • Matching level: species

strain history

  • @ref: 11352
  • history: <- ATCC (Streptosporangium violaceochromogenes subsp. globiphilum) <- Kyowa Ferm. Ind. Co., Ltd., MK-78

doi: 10.13145/bacdive16598.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptosporangiales
  • family: Streptosporangiaceae
  • genus: Streptosporangium
  • species: Streptosporangium violaceochromogenes
  • full scientific name: Streptosporangium violaceochromogenes Kawamoto et al. 1975 (Approved Lists 1980)

@ref: 11352

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptosporangiaceae

genus: Streptosporangium

species: Streptosporangium violaceochromogenes

full scientific name: Streptosporangium violaceochromogenes Kawamoto et al. 1975

strain designation: MK-78

type strain: no

Culture and growth conditions

culture medium

  • @ref: 11352
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 11352
  • growth: positive
  • type: growth
  • temperature: 28

Physiology and metabolism

compound production

@refcompound
11352platomycin A
11352platomycin A, B
11352platomycin B

Isolation, sampling and environmental information

isolation

  • @ref: 11352
  • sample type: soil
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 11352
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: S.violaceochromogenes DNA for 16S ribosomal RNA gene (strain DSM43872)
  • accession: X89952
  • length: 1456
  • database: nuccore
  • NCBI tax ID: 46188

External links

@ref: 11352

culture collection no.: DSM 43872, ATCC 21893

straininfo link

  • @ref: 85625
  • straininfo: 37780

literature

  • topic: Phylogeny
  • Pubmed-ID: 1102513
  • title: Platomycins A and B I Taxonomy of the producing strain and production, isolation and biological properties of platomycins.
  • authors: Takasawa S, Kawamoto I, Takahashi I, Koakura M, Okachi R
  • journal: J Antibiot (Tokyo)
  • DOI: 10.7164/antibiotics.28.656
  • year: 1975
  • mesh: Actinomycetales/classification/*metabolism, Animals, Anti-Bacterial Agents/*isolation & purification/pharmacology, Antibiotics, Antineoplastic/therapeutic use, Bacillus/drug effects, Carcinoma, Ehrlich Tumor/drug therapy, Culture Media, Escherichia coli/drug effects, Lethal Dose 50, Mice, Microbial Sensitivity Tests, Sarcoma 180/drug therapy, Streptococcus/drug effects
  • topic2: Pathogenicity

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
11352Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 43872)https://www.dsmz.de/collection/catalogue/details/culture/DSM-43872
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
85625Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID37780.1StrainInfo: A central database for resolving microbial strain identifiers