Strain identifier
BacDive ID: 165455
Type strain: 
Species: Bifidobacterium breve
Strain history: Y. Benno <-- T. Mitsuoka IV-19 (30010 I-53-8).
NCBI tax ID(s): 1385940 (strain), 1685 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 165455
keywords: genome sequence, Bacteria, mesophilic
description: Bifidobacterium breve JCM 7019 is a mesophilic bacterium that was isolated from Infant feces.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 1685 | species |
| 1385940 | strain |
strain history
- @ref: 67770
- history: Y. Benno <-- T. Mitsuoka IV-19 (30010 I-53-8).
doi: 10.13145/bacdive165455.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium breve
- full scientific name: Bifidobacterium breve Reuter 1963 (Approved Lists 1980)
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium breve
full scientific name: Bifidobacterium breve Reuter 1963
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Infant feces
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Bifidobacterium breve JCM 7019 | 1385940.3 | complete | patric | 1385940 |
| 66792 | Bifidobacterium breve JCM 7019 | 2513237173 | complete | img | 1385940 |
| 66792 | Bifidobacterium breve JCM 7019 | 2588253744 | complete | img | 1385940 |
| 66792 | Bifidobacterium breve JCM 7019 | GCA_000569015 | complete | ncbi | 1385940 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 93.93 | no |
| flagellated | no | 97.451 | no |
| gram-positive | yes | 94.168 | no |
| anaerobic | yes | 97.296 | no |
| halophile | no | 66.506 | no |
| spore-forming | no | 96.001 | no |
| thermophile | no | 96.629 | yes |
| glucose-util | yes | 88.193 | no |
| aerobic | no | 96.803 | no |
| glucose-ferment | yes | 88.553 | no |
External links
@ref: 67770
culture collection no.: JCM 7019
straininfo link
- @ref: 114476
- straininfo: 64957
literature
- topic: Phylogeny
- Pubmed-ID: 29695179
- title: Extraction of the same novel homoglycan mixture from two different strains of Bifidobacterium animalis and three strains of Bifidobacterium breve.
- authors: Alhudhud M, Sadiq S, Ngo HN, Hidalgo-Cantabrana C, Ruas-Madiedo P, van Sinderen D, Humphreys PN, Laws AP
- journal: Benef Microbes
- DOI: 10.3920/BM2017.0145
- year: 2018
- mesh: Alkalies/chemistry, Bifidobacterium animalis/*chemistry/classification, Bifidobacterium breve/*chemistry/classification, Glucose, Glycogen/isolation & purification, Polysaccharides/*analysis
- topic2: Enzymology
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 114476 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID64957.1 |