Strain identifier

BacDive ID: 165388

Type strain: No

Species: Porphyromonas asaccharolytica

Strain history: Y. Benno <-- T. Mitsuoka <-- NCTC 9337 <-- L. P. Garrod strain Trott.

NCBI tax ID(s): 28123 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 165388

keywords: 16S sequence, Bacteria, mesophilic

description: Porphyromonas asaccharolytica JCM 6323 is a mesophilic bacterium that was isolated from Infected incision of hemorrhoids.

NCBI tax id

  • NCBI tax id: 28123
  • Matching level: species

strain history

  • @ref: 67770
  • history: Y. Benno <-- T. Mitsuoka <-- NCTC 9337 <-- L. P. Garrod strain Trott.

doi: 10.13145/bacdive165388.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Porphyromonadaceae
  • genus: Porphyromonas
  • species: Porphyromonas asaccharolytica
  • full scientific name: Porphyromonas asaccharolytica (Holdeman and Moore 1970) Shah and Collins 1988
  • synonyms

    @refsynonym
    20215Bacteroides melaninogenicus subsp. asaccharolyticus
    20215Bacteroides asaccharolyticus

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Porphyromonadaceae

genus: Porphyromonas

species: Porphyromonas asaccharolytica

full scientific name: Porphyromonas asaccharolytica (Holdeman and Moore 1970) Shah and Collins 1988

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Infected incision of hemorrhoids

taxonmaps

  • @ref: 69479
  • File name: preview.99_3456.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_391;96_1725;97_2066;98_2541;99_3456&stattab=map
  • Last taxonomy: Porphyromonas asaccharolytica
  • 16S sequence: AB686660
  • Sequence Identity:
  • Total samples: 14984
  • soil counts: 179
  • aquatic counts: 178
  • animal counts: 14606
  • plant counts: 21

Sequence information

16S sequences

  • @ref: 67770
  • description: Porphyromonas asaccharolytica gene for 16S ribosomal RNA, partial sequence, strain: JCM 6323
  • accession: AB686660
  • length: 1490
  • database: ena
  • NCBI tax ID: 28123

External links

@ref: 67770

culture collection no.: JCM 6323, NCTC 9337

literature

  • topic: Metabolism
  • Pubmed-ID: 6198282
  • title: Degradation of the human proteinase inhibitors alpha-1-antitrypsin and alpha-2-macroglobulin by Bacteroides gingivalis.
  • authors: Carlsson J, Herrmann BF, Hofling JF, Sundqvist GK
  • journal: Infect Immun
  • DOI: 10.1128/iai.43.2.644-648.1984
  • year: 1984
  • mesh: Bacteroides/*metabolism, Electrophoresis, Polyacrylamide Gel, Humans, Immunoelectrophoresis, Trypsin/metabolism, alpha 1-Antitrypsin/*metabolism, alpha-Macroglobulins/*metabolism
  • topic2: Enzymology

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/