Strain identifier
BacDive ID: 165380
Type strain:
Species: Comamonas terrigena
Strain history: J. Tamaoka KS 0079 <-- R. Hugh 260 ('Vibrio percolans') <-- E. Leifson.
NCBI tax ID(s): 32013 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 165380
keywords: 16S sequence, Bacteria, mesophilic
description: Comamonas terrigena JCM 6234 is a mesophilic bacterium of the family Comamonadaceae.
NCBI tax id
- NCBI tax id: 32013
- Matching level: species
strain history
- @ref: 67770
- history: J. Tamaoka KS 0079 <-- R. Hugh 260 ('Vibrio percolans') <-- E. Leifson.
doi: 10.13145/bacdive165380.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Comamonas
- species: Comamonas terrigena
- full scientific name: Comamonas terrigena (ex Hugh 1962) De Vos et al. 1985
synonyms
@ref synonym 20215 Comamonas terrigena 20215 Comamonas percolans
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Comamonas
species: Comamonas terrigena
full scientific name: Comamonas terrigena De Vos et al. 1985
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-8
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_5975.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1;96_704;97_822;98_4438;99_5975&stattab=map
- Last taxonomy: Comamonas terrigena subclade
- 16S sequence: LC379094
- Sequence Identity:
- Total samples: 697
- soil counts: 34
- aquatic counts: 451
- animal counts: 190
- plant counts: 22
Sequence information
16S sequences
- @ref: 67770
- description: Comamonas terrigena gene for 16S rRNA, partial sequence, strain: JCM 6234
- accession: LC379094
- length: 1453
- database: ena
- NCBI tax ID: 32013
GC content
- @ref: 67770
- GC-content: 65.1
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 6234, ATCC 17758, IAM 12053
straininfo link
- @ref: 114449
- straininfo: 36722
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
114449 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID36722.1 |