Strain identifier
BacDive ID: 165348
Type strain: 
Species: Escherichia coli
Strain history: ATCC 884 <-- C. S. Gibbs.
NCBI tax ID(s): 562 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 165348
keywords: 16S sequence, Bacteria, mesophilic
description: Escherichia coli JCM 6127 is a mesophilic bacterium that was isolated from Feces.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
strain history
- @ref: 67770
- history: ATCC 884 <-- C. S. Gibbs.
doi: 10.13145/bacdive165348.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Escherichia
- species: Escherichia coli
- full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus coli
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Feces
- country: China
- origin.country: CHN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_8.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_6;96_7;97_7;98_7;99_8&stattab=map
- Last taxonomy: Enterobacteriaceae
- 16S sequence: LC462174
- Sequence Identity:
- Total samples: 97630
- soil counts: 2111
- aquatic counts: 5613
- animal counts: 88071
- plant counts: 1835
Sequence information
16S sequences
- @ref: 67770
- description: Escherichia coli JCM 6127 gene for 16S ribosomal RNA, partial sequence
- accession: LC462174
- length: 1464
- database: ena
- NCBI tax ID: 562
External links
@ref: 67770
culture collection no.: JCM 6127, ATCC 884, NRRL B-409
straininfo link
- @ref: 114424
- straininfo: 34641
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 114424 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID34641.1 |