Strain identifier

BacDive ID: 165251

Type strain: No

Species: Pseudomonas fragi

Strain history: P.-P. Chang 166.

NCBI tax ID(s): 296 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 165251

keywords: 16S sequence, Bacteria, mesophilic

description: Pseudomonas fragi JCM 5475 is a mesophilic bacterium that was isolated from Pork.

NCBI tax id

  • NCBI tax id: 296
  • Matching level: species

strain history

  • @ref: 67770
  • history: P.-P. Chang 166.

doi: 10.13145/bacdive165251.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas fragi
  • full scientific name: Pseudomonas fragi (Eichholz 1902) Gruber 1905 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacterium fragi

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas fragi

full scientific name: Pseudomonas fragi (Eichholz 1902) Gruber 1905

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Pork

taxonmaps

  • @ref: 69479
  • File name: preview.99_442.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_61;97_89;98_368;99_442&stattab=map
  • Last taxonomy: Pseudomonas
  • 16S sequence: AB685681
  • Sequence Identity:
  • Total samples: 2942
  • soil counts: 460
  • aquatic counts: 830
  • animal counts: 1081
  • plant counts: 571

Sequence information

16S sequences

  • @ref: 67770
  • description: Pseudomonas fragi gene for 16S ribosomal RNA, partial sequence, strain: JCM 5475
  • accession: AB685681
  • length: 1459
  • database: ena
  • NCBI tax ID: 296

External links

@ref: 67770

culture collection no.: JCM 5475

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/