Strain identifier
BacDive ID: 165239
Type strain: 
Species: Pseudomonas fragi
Strain history: P.-P. Chang 153.
NCBI tax ID(s): 296 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 165239
keywords: 16S sequence, Bacteria
description: Pseudomonas fragi JCM 5462 is a bacterium that was isolated from Pork.
NCBI tax id
- NCBI tax id: 296
- Matching level: species
strain history
- @ref: 67770
- history: P.-P. Chang 153.
doi: 10.13145/bacdive165239.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas fragi
- full scientific name: Pseudomonas fragi (Eichholz 1902) Gruber 1905 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium fragi
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas fragi
full scientific name: Pseudomonas fragi (Eichholz 1902) Gruber 1905
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Pork
taxonmaps
- @ref: 69479
- File name: preview.99_442.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_61;97_89;98_368;99_442&stattab=map
- Last taxonomy: Pseudomonas
- 16S sequence: AB685669
- Sequence Identity:
- Total samples: 2942
- soil counts: 460
- aquatic counts: 830
- animal counts: 1081
- plant counts: 571
Sequence information
16S sequences
- @ref: 67770
- description: Pseudomonas fragi gene for 16S ribosomal RNA, partial sequence, strain: JCM 5462
- accession: AB685669
- length: 1459
- database: nuccore
- NCBI tax ID: 296
External links
@ref: 67770
culture collection no.: JCM 5462
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |