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Strain identifier

BacDive ID: 164802

Type strain: No

Species: Vibrio fluvialis

Strain history: T. Shimada 99-77.

NCBI tax ID(s): 676 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 7.1 (current version):
version 7:
version 6:
version 7.1 (current version)

General

@ref: 67770

BacDive-ID: 164802

keywords: 16S sequence, Bacteria, mesophilic

description: Vibrio fluvialis JCM 3740 is a mesophilic bacterium of the family Vibrionaceae.

NCBI tax id

  • NCBI tax id: 676
  • Matching level: species

strain history: T. Shimada 99-77.

doi: 10.13145/bacdive164802.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Vibrionales
  • family: Vibrionaceae
  • genus: Vibrio
  • species: Vibrio fluvialis
  • full scientific name: Vibrio fluvialis Lee et al. 1981
  • synonyms

    • @ref: 20215
    • synonym: Allomonas enterica

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Vibrionales

family: Vibrionaceae

genus: Vibrio

species: Vibrio fluvialis

full scientific name: Vibrio fluvialis Lee et al. 1981

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_418.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_14;96_71;97_312;98_347;99_418&stattab=map
  • Last taxonomy: Vibrio
  • 16S sequence: LC420083
  • Sequence Identity:
  • Total samples: 3818
  • soil counts: 168
  • aquatic counts: 1720
  • animal counts: 1806
  • plant counts: 124

Sequence information

16S sequences

  • @ref: 67770
  • description: Vibrio fluvialis JCM 3740 gene for 16S ribosomal RNA, partial sequence
  • accession: LC420083
  • length: 1475
  • database: ena
  • NCBI tax ID: 676

Genome sequences

  • @ref: 66792
  • description: Vibrio fluvialis JCM3740
  • accession: GCA_021394375
  • assembly level: scaffold
  • database: ncbi
  • NCBI tax ID: 676

External links

@ref: 67770

culture collection no.: JCM 3740

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/