Strain identifier

BacDive ID: 164606

Type strain: Yes

Species: Streptomyces qinzhouensis

Strain Designation: SSL-25

Strain history: K. Li; Sch. of Life Sci., Hunan Univ. of Sci. & Technol., China; SSL-25.

NCBI tax ID(s): 2599401 (species)

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General

@ref: 67770

BacDive-ID: 164606

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Streptomyces qinzhouensis SSL-25 is a mesophilic bacterium that was isolated from Soil from a mangrove wetland at Qinzhou Bay.

NCBI tax id

  • NCBI tax id: 2599401
  • Matching level: species

strain history

  • @ref: 67770
  • history: K. Li; Sch. of Life Sci., Hunan Univ. of Sci. & Technol., China; SSL-25.

doi: 10.13145/bacdive164606.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces qinzhouensis
  • full scientific name: Streptomyces qinzhouensis Zhu et al. 2020

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Streptomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces qinzhouensis

full scientific name: Streptomyces qinzhouensis Zhu et al. 2020

strain designation: SSL-25

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

observation

@refobservation
67770quinones: MK-9(H6), MK-9(H8), MK-9(H4)
69612The polar lipids contain diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannoside and several unidentified phospholipids.

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
696125291gelatin-assimilation
6961216136hydrogen sulfide-assimilation
6961262968cellulose-hydrolysis
696124853esculin-hydrolysis
6961217632nitrate-reduction
69612milk+assimilation
6961212936D-galactose+carbon source
6961217634D-glucose+carbon source
6961229864mannitol+carbon source
6961233942ribose+carbon source
6961217992sucrose+carbon source
6961227082trehalose+carbon source
6961237166xylan+carbon source
6961253424tween 20+degradation
6961253423tween 40+degradation
6961253425tween 60+degradation
6961253426tween 80+degradation
6961228017starch+hydrolysis
6961216467L-arginine+nitrogen source
6961215971L-histidine+nitrogen source
6961216857L-threonine+nitrogen source
6961216811methionine+nitrogen source
6961228044phenylalanine+nitrogen source

fatty acid profile

  • fatty acids

    @reffatty acidpercentage
    69612C12:0 anteiso1.7
    69612C13:0 anteiso1.5
    69612C14:01.9
    69612C14:0 iso2.9
    69612C15:0 anteiso7
    69612C15:0 iso3.7
    69612C15:1 w5c4.7
    69612C16:012.2
    69612C16:013.8
    69612C16:0 10-methyl1.6
    69612C16:1 iso h1.6
    69612C16:1 w7c/C16:1 w6c10.8
    69612C17:0 anteiso3.7
    69612C17:0 iso1.3
    69612C17:1 w5c iso4.2
    69612C17:1 w9c anteiso2
    69612C18:04.7
    69612C18:0 ante/C18:2 w6,9c5.7
    69612C18:1 w9c2.5
    69612C19:1 w7c / C19:1 w6c1.3
    69612C20:4 w6,9,12,15c3.7
  • type of FA analysis: whole cell analysis
  • software version: Sherlock 6.2B
  • library/peak naming table: RTSBA6
  • system: MIS MIDI

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
67770Soil from a mangrove wetland at Qinzhou BayGuangxi Zhuang Autonomous RegionChinaCHNAsia
69612a soil sample collected mangrove wetland at Qinzhou Bay, Guangxi Zhuang Autonomous Region, PR ChinaQinzhou BayChinaCHNAsia

Sequence information

16S sequences

  • @ref: 67770
  • description: Streptomyces sp. strain SSL-25 16S ribosomal RNA gene, partial sequence
  • accession: MK696373
  • length: 1395
  • database: ena
  • NCBI tax ID: 2599401

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
67770Streptomyces qinzhouensis SSL-25GCA_007856155completencbi2599401
69612genome sequenceCP042266.1ncbi2599401

GC content

  • @ref: 69612
  • GC-content: 71.5
  • method: genome sequence analysis

External links

@ref: 67770

culture collection no.: JCM 33585, CICC 11054

literature

  • topic: Phylogeny
  • Pubmed-ID: 31951192
  • title: Streptomyces qinzhouensis sp. nov., a mangrove soil actinobacterium.
  • authors: Zhu P, Xu Y, Fu J, Liao Y
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.003974
  • year: 2020
  • mesh: Bacterial Typing Techniques, Cell Wall/chemistry, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Genome Size, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Soil, *Soil Microbiology, Streptomyces/*classification/isolation & purification, Vitamin K 2/analogs & derivatives/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69612Peng Zhu, Youhou Xu, Jianjun Fu and Yongyan LiaoStreptomyces qinzhouensis sp. nov., a mangrove soil actinobacterium10.1099/ijsem.0.003974