General

@ref: 67770

BacDive-ID: 164498

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Gordonia insulae JCM 33277 is a mesophilic bacterium that was isolated from Coastal soil in Seonyu Island.

NCBI tax id

• NCBI tax id: 2420509
• Matching level: species

strain history

• @ref: 67770
• history: S. B. Kim; Chungnam Natl. Univ., South Korea; MMS17-SY073.

doi: 10.13145/bacdive164498.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Mycobacteriales
• family: Gordoniaceae
• genus: Gordonia
• species: Gordonia insulae
• full scientific name: Gordonia insulae Kim et al. 2020

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Gordoniaceae

genus: Gordonia

species: Gordonia insulae

full scientific name: Gordonia insulae Kim et al. 2020

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 25

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-9(H₂)

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Coastal soil in Seonyu Island
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Gordonia insulae strain MMS17-SY073 16S ribosomal RNA gene, partial sequence
• accession: MG385705
• length: 1488
• database: nuccore
• NCBI tax ID: 2420509

Genome sequences

• @ref: 67770
• description: Gordonia insulae MMS17-SY073
• accession: GCA_003855095
• assembly level: complete
• database: ncbi
• NCBI tax ID: 2420509

GC content

• @ref: 67770
• GC-content: 67.4
• method: genome sequence analysis

External links

@ref: 67770

culture collection no.: JCM 33277, KCTC 49257

literature

• topic: Phylogeny
• Pubmed-ID: 31995467
• title: Gordonia insulae sp. nov., isolated from an island soil.
• authors: Kim YS, Roh SG, Kim SB
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.004023
• year: 2020
• mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Gordonia Bacterium/*classification/isolation & purification, Islands, Mycolic Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Transcriptome

Reference