Strain identifier

BacDive ID: 16444

Type strain: Yes

Species: Streptomyces mordarskii

Strain Designation: W3591

Strain history: KCC S-0140 <-- M. Mayama <-- IFO 3192 <-- Westerdijk, CBS.

NCBI tax ID(s): 1226758 (species)

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General

@ref: 16662

BacDive-ID: 16444

DSM-Number: 42004

keywords: 16S sequence, Bacteria, spore-forming, mesophilic

description: Streptomyces mordarskii W3591 is a spore-forming, mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 1226758
  • Matching level: species

strain history

@refhistory
16662<- M. Goodfellow, Univ. Newcastle; NNRL B-1346 <- R. E. Gordon, IMRU
67770KCC S-0140 <-- M. Mayama <-- IFO 3192 <-- Westerdijk, CBS.

doi: 10.13145/bacdive16444.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces mordarskii
  • full scientific name: Streptomyces mordarskii Kumar and Goodfellow 2008

@ref: 16662

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces mordarskii

full scientific name: Streptomyces mordarskii Kumar and Goodfellow 2008

strain designation: W3591

type strain: yes

Morphology

pigmentation

  • @ref: 32383
  • production: no

multimedia

  • @ref: 16662
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_42004.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
16662ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://mediadive.dsmz.de/medium/84Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
16662GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
16662STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)yeshttps://mediadive.dsmz.de/medium/252Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
16662positivegrowth28mesophilic
32383positivegrowth10-37
67770positivegrowth28mesophilic

culture pH

  • @ref: 32383
  • ability: positive
  • type: growth
  • pH: 06-10
  • PH range: alkaliphile

Physiology and metabolism

spore formation

  • @ref: 32383
  • spore formation: yes

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3238318403L-arabitol+carbon source
3238317057cellobiose+carbon source
3238328757fructose+carbon source
3238328260galactose+carbon source
3238317234glucose+carbon source
3238328087glycogen+carbon source
3238317306maltose+carbon source
3238337684mannose+carbon source
3238316634raffinose+carbon source
3238326546rhamnose+carbon source
3238333942ribose+carbon source
3238317992sucrose+carbon source
3238327082trehalose+carbon source
3238318222xylose+carbon source
323834853esculin+hydrolysis

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
16662soilJapanJPNAsia
67770SoilJapanJPNAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 16662
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Bifidobacterium longum subsp. longum gene for 16S rRNA, partial sequence, strain: JCM 5052AB116315475ena1679
20218Streptomyces hygroscopicus subsp. hygroscopicus gene for 16S rRNA, partial sequence, strain: NBRC 3192AB1847401470ena68042
32383Streptomyces mordarskii strain NRRL B-1346 16S ribosomal RNA gene, partial sequenceEF4087351450nuccore1226758

GC content

  • @ref: 32383
  • GC-content: 70.4

External links

@ref: 16662

culture collection no.: DSM 42004, ATCC 10976, NRRL B-1346, ETH 13081, DSM 40771, IMET 41368, IMRU 3591, LBG A 3042, RIA 99, IFO 3192, JCM 4140, NBRC 3192, CECT 3137, HUT 6026, ICMP 496, IFM 1100, JCM 5052, KCTC 9029, NBIMCC 875, NCIMB 14451

straininfo link

  • @ref: 85481
  • straininfo: 92633

literature

  • topic: Phylogeny
  • Pubmed-ID: 18523180
  • title: Five new members of the Streptomyces violaceusniger 16S rRNA gene clade: Streptomyces castelarensis sp. nov., comb. nov., Streptomyces himastatinicus sp. nov., Streptomyces mordarskii sp. nov., Streptomyces rapamycinicus sp. nov. and Streptomyces ruanii sp. nov.
  • authors: Kumar Y, Goodfellow M
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.65408-0
  • year: 2008
  • mesh: Bacterial Typing Techniques, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, *Genes, rRNA, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, RNA, Ribosomal, 16S/*genetics, Sequence Analysis, DNA, Species Specificity, Streptomyces/*classification/genetics/physiology
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmedID_cross_reference
16662Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42004)https://www.dsmz.de/collection/catalogue/details/culture/DSM-42004
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
32383Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2877604128609
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
85481Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID92633.1StrainInfo: A central database for resolving microbial strain identifiers