General

@ref: 67770

BacDive-ID: 164379

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Flavobacterium supellecticarium JCM 32838 is a mesophilic bacterium that was isolated from Abandoned furniture in National Chung Hsing University.

NCBI tax id

• NCBI tax id: 2565924
• Matching level: species

strain history

• @ref: 67770
• history: C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-CTC003.

doi: 10.13145/bacdive164379.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacteroidota
• domain: Bacteria
• phylum: Bacteroidota
• class: Flavobacteriia
• order: Flavobacteriales
• family: Flavobacteriaceae
• genus: Flavobacterium
• species: Flavobacterium supellecticarium
• full scientific name: Flavobacterium supellecticarium Lin et al. 2020

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Flavobacterium

species: Flavobacterium supellecticarium

full scientific name: Flavobacterium supellecticarium Lin et al. 2020

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-6

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Abandoned furniture (synthetic wooden board) in National Chung Hsing University
• geographic location: Taichung City
• country: Taiwan
• origin.country: TWN
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_42508.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_66;96_19670;97_24418;98_30890;99_42508&stattab=map
• Last taxonomy: Flavobacterium
• 16S sequence: MH028244
• Sequence Identity:
• Total samples: 4456
• soil counts: 905
• aquatic counts: 2594
• animal counts: 739
• plant counts: 218

Sequence information

16S sequences

• @ref: 67770
• description: Flavobacterium sp. strain CC-CTC003 16S ribosomal RNA gene, partial sequence
• accession: MH028244
• length: 1511
• database: ena
• NCBI tax ID: 2565924

Genome sequences

• @ref: 67770
• description: Flavobacterium supellecticarium CC-CTC003
• accession: GCA_004801375
• assembly level: contig
• database: ncbi
• NCBI tax ID: 2565924

GC content

• @ref: 67770
• GC-content: 39.2
• method: genome sequence analysis

Genome-based predictions

predictions

External links

@ref: 67770

culture collection no.: JCM 32838, BCRC 81146

literature

• topic: Phylogeny
• Pubmed-ID: 32453684
• title: Flavobacterium supellecticarium sp. nov., isolated from an abandoned construction timber.
• authors: Lin SY, Chen WM, Huang GH, Hameed A, Chang CT, Tsai CF, Young CC
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.004227
• year: 2020
• mesh: Bacterial Typing Techniques, Base Composition, Construction Materials/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Flavobacterium/*classification/isolation & purification, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Spermidine/analogs & derivatives/chemistry, Taiwan, Vitamin K 2/analogs & derivatives/chemistry, Wood/*microbiology
• topic2: Transcriptome

Reference