General

@ref: 67770

BacDive-ID: 164375

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Nocardioides euryhalodurans JCM 32831 is a mesophilic bacterium that was isolated from Sandy soil sampled around a beach on Seonyu Island.

NCBI tax id

• NCBI tax id: 2518370
• Matching level: species

strain history

• @ref: 67770
• history: S. B. Kim; Chungnam Natl. Univ., South Korea; MMS17-SY117.

doi: 10.13145/bacdive164375.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Propionibacteriales
• family: Nocardioidaceae
• genus: Nocardioides
• species: Nocardioides euryhalodurans
• full scientific name: Nocardioides euryhalodurans Roh et al. 2020

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Propionibacteriales

family: Nocardioidaceae

genus: Nocardioides

species: Nocardioides euryhalodurans

full scientific name: Nocardioides euryhalodurans Roh et al. 2020

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-8(H₄)

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Sandy soil sampled around a beach on Seonyu Island
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Nocardioides euryhalodurans strain MMS17-SY117 16S ribosomal RNA gene, partial sequence
• accession: MH166741
• length: 1458
• database: ena
• NCBI tax ID: 2518370

Genome sequences

• @ref: 67770
• description: Nocardioides euryhalodurans MMS17-SY117
• accession: GCA_004564375
• assembly level: complete
• database: ncbi
• NCBI tax ID: 2518370

GC content

• @ref: 67770
• GC-content: 72.2
• method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 32831, KCTC 49175

literature

• topic: Phylogeny
• Pubmed-ID: 32141810
• title: Nocardioides euryhalodurans sp. nov., Nocardioides seonyuensis sp. nov. and Nocardioides eburneiflavus sp. nov., isolated from soil.
• authors: Roh SG, Lee C, Kim MK, Kang HJ, Kim YS, Kim MJ, Malik A, Kim SB
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.004095
• year: 2020
• mesh: Actinobacteria/*classification/isolation & purification, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sand/microbiology, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Transcriptome

Reference