Strain identifier

BacDive ID: 16428

Type strain: Yes

Species: Streptomyces bangladeshensis

Strain Designation: AAB-4

Strain history: LMG 22738 <-- M. A. A. Al-Bari AAB-4.

NCBI tax ID(s): 295352 (species)

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General

@ref: 10537

BacDive-ID: 16428

DSM-Number: 41874

keywords: 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive, motile

description: Streptomyces bangladeshensis AAB-4 is an aerobe, spore-forming, mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 295352
  • Matching level: species

strain history

@refhistory
10537<- NRRL
67770LMG 22738 <-- M. A. A. Al-Bari AAB-4.

doi: 10.13145/bacdive16428.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces bangladeshensis
  • full scientific name: Streptomyces bangladeshensis Al-Bari et al. 2005

@ref: 10537

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces bangladeshensis

full scientific name: Streptomyces bangladeshensis Al-Bari et al. 2005

strain designation: AAB-4

type strain: yes

Morphology

cell morphology

  • @ref: 31427
  • gram stain: positive
  • motility: yes

pigmentation

  • @ref: 31427
  • production: yes

multimedia

  • @ref: 10537
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_41874.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 10537
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
10537positivegrowth28mesophilic
31427positivegrowth20-50
31427positiveoptimum35mesophilic
67770positivegrowth28mesophilic

culture pH

@refabilitytypepHPH range
31427positivegrowth6.0-11.0alkaliphile
31427positiveoptimum8

Physiology and metabolism

oxygen tolerance

  • @ref: 31427
  • oxygen tolerance: aerobe

spore formation

  • @ref: 31427
  • spore formation: yes

compound production

  • @ref: 10537
  • compound: bis-(2-ethylhexyl)phthalate

halophily

@refsaltgrowthtested relationconcentration
31427NaClpositivegrowth2 %
31427NaClpositiveoptimum2 %

observation

  • @ref: 31427
  • observation: aggregates in chains

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3142722599arabinose+carbon source
3142728757fructose+carbon source
3142717234glucose+carbon source
3142717754glycerol+carbon source
3142717306maltose+carbon source
3142729864mannitol+carbon source
3142737684mannose+carbon source
3142716634raffinose+carbon source
3142726546rhamnose+carbon source
3142717992sucrose+carbon source
3142727082trehalose+carbon source

metabolite production

@refChebi-IDmetaboliteproduction
3142716136hydrogen sulfideyes
6777017747bis(2-ethylhexyl)phthalateyes

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
10537soilNatoreBangladeshBGDAsia
67770SoilNatoreBangladeshBGDAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_3790.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_91;97_287;98_1422;99_3790&stattab=map
  • Last taxonomy: Streptomyces
  • 16S sequence: AY750056
  • Sequence Identity:
  • Total samples: 78
  • soil counts: 67
  • animal counts: 9
  • plant counts: 2

Safety information

risk assessment

  • @ref: 10537
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
31427Streptomyces bangladeshensis strain AAB-4 16S ribosomal RNA gene, partial sequenceAY750056.1421nuccore295352
10537Streptomyces bangladeshensis strain AAB-4 16S ribosomal RNA gene, partial sequenceAY7500561421ena295352

GC content

  • @ref: 31427
  • GC-content: 69-78

External links

@ref: 10537

culture collection no.: DSM 41874, LMG 22738, NRRL B-24326, JCM 14924, NBRC 102113

straininfo link

  • @ref: 85469
  • straininfo: 135993

literature

  • topic: Phylogeny
  • Pubmed-ID: 16166697
  • title: Streptomyces bangladeshensis sp. nov., isolated from soil, which produces bis-(2-ethylhexyl)phthalate.
  • authors: Al-Bari MAA, Bhuiyan MSA, Flores ME, Petrosyan P, Garcia-Varela M, Islam MAU
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.63516-0
  • year: 2005
  • mesh: Bangladesh, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Genes, rRNA, Molecular Sequence Data, Phenotype, Phthalic Acids/chemistry/*metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Spores, Bacterial/physiology, Streptomyces/*classification/genetics/isolation & purification/physiology
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitleID_cross_referencepubmed
10537Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41874)https://www.dsmz.de/collection/catalogue/details/culture/DSM-41874
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
31427Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2773428776041
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
85469Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID135993.1StrainInfo: A central database for resolving microbial strain identifiers