General

@ref: 67770

BacDive-ID: 164241

keywords: 16S sequence, Bacteria, mesophilic

description: Edaphorhabdus rosea JCM 32366 is a mesophilic bacterium that was isolated from Soil from Udo Island.

NCBI tax id

• NCBI tax id: 2079447
• Matching level: species

strain history

• @ref: 67770
• history: T. Seo; Dongguk Univ., South Korea; UDD1.

doi: 10.13145/bacdive164241.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacteroidota
• domain: Bacteria
• phylum: Bacteroidota
• class: Cytophagia
• order: Cytophagales
• family: Cytophagaceae
• genus: Edaphorhabdus
• species: Edaphorhabdus rosea
• full scientific name: Edaphorhabdus rosea Chhetri et al. 2019

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Cytophagia

order: Cytophagales

family: Cytophagaceae

genus: Edaphorhabdus

species: Edaphorhabdus rosea

full scientific name: Edaphorhabdus rosea Chhetri et al. 2019

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 25

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Soil from Udo Island
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Edaphorhabdus rosea 16S ribosomal RNA gene, partial sequence
• accession: KY924608
• length: 1453
• database: nuccore
• NCBI tax ID: 2079447

External links

@ref: 67770

culture collection no.: JCM 32366, KCTC 62117

literature

• topic: Phylogeny
• Pubmed-ID: 30027519
• title: Edaphorhabdus rosea gen. nov., sp. nov., a new member of the family Cytophagaceae isolated from soil in South Korea.
• authors: Chhetri G, Yang D, Choi J, Kim H, Seo T
• journal: Antonie Van Leeuwenhoek
• DOI: 10.1007/s10482-018-1127-4
• year: 2018
• mesh: Aerobiosis/*genetics, Base Composition, Cytophagaceae/*classification/genetics/isolation & purification, DNA, Bacterial/*genetics, Fatty Acids/biosynthesis, Glycolipids/biosynthesis, Phosphatidylethanolamines/biosynthesis, *Phylogeny, Phylogeography, RNA, Ribosomal, 16S/*genetics, Republic of Korea, Soil Microbiology, Vitamin K 2/metabolism
• topic2: Enzymology

Reference