General

@ref: 67770

BacDive-ID: 164227

keywords: 16S sequence, Bacteria, mesophilic

description: Rhizobium panacihumi JCM 32251 is a mesophilic bacterium that was isolated from Ginseng-cultivated soil in Gochang-gun.

NCBI tax id

• NCBI tax id: 2008450
• Matching level: species

strain history

• @ref: 67770
• history: D.-C. Yang and Y.-J. Kim; Kyung Hee Univ., South Korea; DCY116.

doi: 10.13145/bacdive164227.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Alphaproteobacteria
• order: Hyphomicrobiales
• family: Rhizobiaceae
• genus: Rhizobium
• species: Rhizobium panacihumi
• full scientific name: Rhizobium panacihumi Kang et al. 2021

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Hyphomicrobiales

family: Rhizobiaceae

genus: Rhizobium

species: Rhizobium panacihumi

full scientific name: Rhizobium panacihumi Kang et al.

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30

Physiology and metabolism

compound production

observation

• @ref: 67770
• observation: quinones: Q-10

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Ginseng-cultivated soil in Gochang-gun
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Rhizobium panacihumi 16S ribosomal RNA gene, partial sequence
• accession: KY996486
• length: 1417
• database: nuccore
• NCBI tax ID: 2008450

GC content

• @ref: 67770
• GC-content: 57.2
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 32251, KCTC 62017

literature

• topic: Phylogeny
• Pubmed-ID: 30259064
• title: Rhizobium panacihumi sp. nov., an isolate from ginseng-cultivated soil, as a potential plant growth promoting bacterium.
• authors: Kang JP, Huo Y, Kim YJ, Ahn JC, Hurh J, Yang DU, Yang DC
• journal: Arch Microbiol
• DOI: 10.1007/s00203-018-1578-z
• year: 2018
• mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Genes, Essential/genetics, Nucleic Acid Hybridization, Oxidoreductases/genetics, Panax/*microbiology, Phylogeny, Plant Development/*physiology, RNA, Ribosomal, 16S/genetics, Republic of Korea, Rhizobium/*classification/genetics/*isolation & purification, Sequence Analysis, DNA, Soil, Soil Microbiology
• topic2: Enzymology

Reference