Strain identifier
BacDive ID: 164160
Type strain:
Species: Bifidobacterium longum subsp. longum
Strain history: S. Fukiya; Res. Fac. of Agric., Hokkaido Univ., Japan; 105-A <-- Y. Kano <-- T. Mitsuoka.
NCBI tax ID(s): 1679 (subspecies)
General
@ref: 67770
BacDive-ID: 164160
keywords: genome sequence, Bacteria, mesophilic
description: Bifidobacterium longum subsp. longum JCM 31944 is a mesophilic bacterium that was isolated from Human feces.
NCBI tax id
- NCBI tax id: 1679
- Matching level: subspecies
strain history
- @ref: 67770
- history: S. Fukiya; Res. Fac. of Agric., Hokkaido Univ., Japan; 105-A <-- Y. Kano <-- T. Mitsuoka.
doi: 10.13145/bacdive164160.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium longum subsp. longum
- full scientific name: Bifidobacterium longum subsp. longum (Reuter 1963) Mattarelli et al. 2008 (Approved Lists 1980)
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium longum subsp. longum
full scientific name: Bifidobacterium longum subsp. longum (Reuter 1963) Mattarelli et al. 2008
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Human feces
Sequence information
Genome sequences
- @ref: 67770
- description: Bifidobacterium longum 105-A
- accession: GCA_000829295
- assembly level: complete
- database: ncbi
- NCBI tax ID: 216816
External links
@ref: 67770
culture collection no.: JCM 31944
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Genetics | 29934330 | A Transposon Mutagenesis System for Bifidobacterium longum subsp. longum Based on an IS3 Family Insertion Sequence, ISBlo11. | Sakanaka M, Nakakawaji S, Nakajima S, Fukiya S, Abe A, Saburi W, Mori H, Yokota A | Appl Environ Microbiol | 10.1128/AEM.00824-18 | 2018 | Bifidobacterium longum/*genetics, DNA Transposable Elements/*genetics, Gastrointestinal Microbiome/*genetics, Genome, Bacterial/genetics, Humans, Intestines/microbiology, Isomaltose/analogs & derivatives/metabolism, Mutagenesis/*genetics, Plasmids/*genetics, Sequence Analysis, DNA, Transposases/genetics, Trehalose/metabolism, alpha-Glucosidases/genetics | Pathogenicity |
Pathogenicity | 34553672 | Next-generation prebiotic promotes selective growth of bifidobacteria, suppressing Clostridioides difficile. | Hirano R, Sakanaka M, Yoshimi K, Sugimoto N, Eguchi S, Yamauchi Y, Nara M, Maeda S, Ami Y, Gotoh A, Katayama T, Iida N, Kato T, Ohno H, Fukiya S, Yokota A, Nishimoto M, Kitaoka M, Nakai H, Kurihara S | Gut Microbes | 10.1080/19490976.2021.1973835 | 2021 | ATP-Binding Cassette Transporters/metabolism, Animals, Bifidobacterium/genetics/*growth & development, Bifidobacterium longum subspecies infantis/genetics/*growth & development, Clostridioides difficile/*growth & development, Disaccharides/*pharmacology, Gastrointestinal Microbiome/drug effects, Humans, Intestines/microbiology, Male, Mice, Mice, Inbred C57BL, Prebiotics/*analysis | Metabolism |
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |