Strain identifier
BacDive ID: 164152
Type strain: 
Species: Methanosarcina mazei
Strain history: V. Shcherbakova; VKM, Russia; JL01.
NCBI tax ID(s): 2209 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 164152
keywords: genome sequence, Archaea
description: Methanosarcina mazei JCM 31898 is an archaeon that was isolated from Holocene permafrost in the Russian Arctic.
NCBI tax id
- NCBI tax id: 2209
- Matching level: species
strain history
- @ref: 67770
- history: V. Shcherbakova; VKM, Russia; JL01.
doi: 10.13145/bacdive164152.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Methanomicrobia
- order: Methanosarcinales
- family: Methanosarcinaceae
- genus: Methanosarcina
- species: Methanosarcina mazei
- full scientific name: Methanosarcina mazei corrig. (Barker 1936) Mah and Kuhn 1984
synonyms
@ref synonym 20215 Methanosarcina frisia 20215 Methanococcus frisius 20215 Methanosarcina mazeii 20215 Methanococcus mazei
@ref: 67770
domain: Archaea
phylum: Euryarchaeota
class: Methanomicrobia
order: Methanosarcinales
family: Methanosarcinaceae
genus: Methanosarcina
species: Methanosarcina mazei
full scientific name: Methanosarcina mazei (Barker 1936) Mah and Kuhn 1984
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Holocene permafrost in the Russian Arctic
Sequence information
Genome sequences
- @ref: 67770
- description: Methanosarcina mazei JL01
- accession: GCA_005485005
- assembly level: chromosome
- database: ncbi
- NCBI tax ID: 2209
GC content
- @ref: 67770
- GC-content: 41.6
- method: genome sequence analysis
External links
@ref: 67770
culture collection no.: JCM 31898, VKM B-2370
straininfo link
- @ref: 114154
- straininfo: 369388
literature
- topic: Metabolism
- Pubmed-ID: 17428301
- title: Biogeochemistry of methane and methanogenic archaea in permafrost.
- authors: Rivkina E, Shcherbakova V, Laurinavichius K, Petrovskaya L, Krivushin K, Kraev G, Pecheritsina S, Gilichinsky D
- journal: FEMS Microbiol Ecol
- DOI: 10.1111/j.1574-6941.2007.00315.x
- year: 2007
- mesh: Arctic Regions, Carbon Isotopes/analysis, Conservation of Natural Resources, Euryarchaeota/*isolation & purification/metabolism, Geologic Sediments/*chemistry/microbiology, Methane/*analysis/metabolism, Methanobacterium/*isolation & purification/metabolism
- topic2: Enzymology
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 114154 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID369388.1 |