Strain identifier
BacDive ID: 1641
Type strain:
Species: Bartonella queenslandensis
Strain Designation: AUST/NH12
Strain history: CIP <- 2005, P.E. Fournier, CNRS UMR 6020, Marseille, France: strain AUST/NH12
NCBI tax ID(s): 481138 (species)
General
@ref: 17241
BacDive-ID: 1641
DSM-Number: 23498
keywords: 16S sequence, Bacteria, microaerophile, mesophilic, Gram-negative, animal pathogen
description: Bartonella queenslandensis AUST/NH12 is a microaerophile, mesophilic, Gram-negative animal pathogen that was isolated from blood of Melomys sp..
NCBI tax id
- NCBI tax id: 481138
- Matching level: species
strain history
@ref | history |
---|---|
37463 | 2005, P.E. Fournier, CNRS UMR 6020, Marseille, France: strain AUST/NH12 |
17241 | <- CCUG <- P.-E. Fournier; AUST/NH12 |
122108 | CIP <- 2005, P.E. Fournier, CNRS UMR 6020, Marseille, France: strain AUST/NH12 |
doi: 10.13145/bacdive1641.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Bartonellaceae
- genus: Bartonella
- species: Bartonella queenslandensis
- full scientific name: Bartonella queenslandensis Gundi et al. 2009
@ref: 17241
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Bartonellaceae
genus: Bartonella
species: Bartonella queenslandensis
full scientific name: Bartonella queenslandensis Gundi et al. 2009
strain designation: AUST/NH12
type strain: yes
Morphology
cell morphology
@ref | gram stain | cell length | cell width | motility | cell shape |
---|---|---|---|---|---|
23361 | negative | 1-2 µm | 0.5 µm | no | |
122108 | negative | no | rod-shaped |
colony morphology
@ref | type of hemolysis | colony size | colony color | colony shape | incubation period | medium used |
---|---|---|---|---|---|---|
17241 | gamma | |||||
23361 | 0.5 mm | white | irregular | 7 days | Columbia agar with 5 % sheep blood | |
59451 | 4 days | |||||
122108 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
17241 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
23361 | Columbia agar with 5 % sheep blood | yes | ||
37463 | MEDIUM 45 - for Columbia agar with sheep blood | yes | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml) | |
122108 | CIP Medium 45 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=45 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
17241 | positive | growth | 37 | mesophilic |
23361 | positive | growth | 37 | mesophilic |
37463 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
17241 | microaerophile |
59451 | microaerophile |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
122108 | 17632 | nitrate | - | reduction |
122108 | 16301 | nitrite | - | reduction |
68377 | 17634 | D-glucose | - | builds acid from |
68377 | 15824 | D-fructose | - | builds acid from |
68377 | 17306 | maltose | - | builds acid from |
68377 | 17992 | sucrose | - | builds acid from |
68377 | 18257 | ornithine | - | degradation |
68377 | 27897 | tryptophan | - | energy source |
antibiotic resistance
@ref | ChEBI | metabolite | is antibiotic | is resistant | is sensitive |
---|---|---|---|---|---|
23361 | 28001 | vancomycin | yes | yes | |
23361 | 22507 | aminoglycoside antibiotic | yes | yes | |
23361 | 50845 | doxycycline | yes | yes | |
23361 | 25105 | macrolide antibiotic | yes | yes | |
23361 | 28077 | rifampicin | yes | yes |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68377 | 35581 | indole | no |
122108 | 35581 | indole | no |
metabolite tests
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
17241 | catalase | - | 1.11.1.6 |
17241 | cytochrome-c oxidase | - | 1.9.3.1 |
68382 | alpha-fucosidase | + | 3.2.1.51 |
68382 | alpha-mannosidase | + | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | - | |
68382 | acid phosphatase | - | 3.1.3.2 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | + | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | esterase lipase (C 8) | + | |
68382 | esterase (C 4) | + | |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68377 | tryptophan deaminase | - | 4.1.99.1 |
68377 | beta-galactosidase | - | 3.2.1.23 |
68377 | alkaline phosphatase | - | 3.1.3.1 |
68377 | ornithine decarboxylase | - | 4.1.1.17 |
68377 | beta-lactamase | - | 3.5.2.6 |
122108 | oxidase | - | |
122108 | alcohol dehydrogenase | - | 1.1.1.1 |
122108 | catalase | - | 1.11.1.6 |
122108 | lysine decarboxylase | - | 4.1.1.18 |
122108 | ornithine decarboxylase | - | 4.1.1.17 |
122108 | urease | - | 3.5.1.5 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
122108 | - | - | + | + | - | + | - | - | + | - | - | - | - | - | - | + | - | - | + | + |
API NH
@ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
17241 | - | - | - | - | - | - | +/- | - | - | - | + | - | - |
17241 | - | - | - | - | - | - | - | +/- | - | - | - | + | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | host species | geographic location | country | origin.country | continent | isolation date |
---|---|---|---|---|---|---|---|
17241 | blood of Melomys sp. | Melomys sp. | Queensland | Australia | AUS | Australia and Oceania | |
59451 | Melomys sp. blood | Australia | AUS | Australia and Oceania | |||
122108 | Blood, Melomys sp. | Queensland | Australia | AUS | Australia and Oceania | 2000 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Mammals | #Muridae (Mouse/Rat) |
#Host Body Product | #Fluids | #Blood |
taxonmaps
- @ref: 69479
- File name: preview.99_972.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_247;97_656;98_758;99_972&stattab=map
- Last taxonomy: Bartonella
- 16S sequence: EU111754
- Sequence Identity:
- Total samples: 1497
- soil counts: 187
- aquatic counts: 669
- animal counts: 589
- plant counts: 52
Safety information
risk assessment
@ref | pathogenicity animal | biosafety level | biosafety level comment |
---|---|---|---|
17241 | yes | 2 | Risk group (German classification) |
122108 | 2 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Bartonella queenslandensis strain AUST/NH12 16S-23S ribosomal RNA intergenic spacer, partial sequence | EU111765 | 1303 | ena | 481138 |
17241 | Bartonella queenslandensis strain AUST/NH12 16S ribosomal RNA gene, partial sequence | EU111754 | 1410 | ena | 481138 |
External links
@ref: 17241
culture collection no.: DSM 23498, CCUG 52167, CIP 109057, CSUR B617
straininfo link
- @ref: 71288
- straininfo: 364823
literature
- topic: Phylogeny
- Pubmed-ID: 19628592
- title: Bartonella rattaustraliani sp. nov., Bartonella queenslandensis sp. nov. and Bartonella coopersplainsensis sp. nov., identified in Australian rats.
- authors: Gundi VA, Taylor C, Raoult D, La Scola B
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.002865-0
- year: 2009
- mesh: Animals, Bacterial Proteins/genetics, Bartonella/*classification/genetics/*isolation & purification, Blood/microbiology, DNA, Bacterial/genetics, DNA, Ribosomal Spacer/genetics, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Rodentia/*microbiology
- topic2: Genetics
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
17241 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23498) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23498 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
23361 | Vijay A. K. B. Gundi, Carmel Taylor, Didier Raoult, Bernard La Scola | 10.1099/ijs.0.002865-0 | Bartonella rattaustraliani sp. nov., Bartonella queenslandensis sp. nov. and Bartonella coopersplainsensis sp. nov., identified in Australian rats | IJSEM 59: 2956-2961 2009 | 19628592 | |
37463 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/6756 | ||||
59451 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 52167) | https://www.ccug.se/strain?id=52167 | |||
68377 | Automatically annotated from API NH | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
71288 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID364823.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
122108 | Curators of the CIP | Collection of Institut Pasteur (CIP 109057) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20109057 |