Strain identifier
BacDive ID: 164058
Type strain: 
Species: Achromobacter sp.
Strain history: P. Sar; Dept. of Biotechnol., Indian Inst. of Technol. Kharagpur, India; KAs 3-5.
NCBI tax ID(s): 134375 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 164058
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Achromobacter sp. JCM 31426 is a mesophilic bacterium of the family Alcaligenaceae.
NCBI tax id
- NCBI tax id: 134375
- Matching level: species
strain history
- @ref: 67770
- history: P. Sar; Dept. of Biotechnol., Indian Inst. of Technol. Kharagpur, India; KAs 3-5.
doi: 10.13145/bacdive164058.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Alcaligenaceae
- genus: Achromobacter
- species: Achromobacter sp.
- full scientific name: Achromobacter Yabuuchi and Yano 1981
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Alcaligenaceae
genus: Achromobacter
species: Achromobacter sp.
full scientific name: Achromobacter sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Sequence information
16S sequences
- @ref: 67770
- description: Achromobacter sp. KAs3-5 16S ribosomal RNA gene, partial sequence
- accession: JX173986
- length: 1389
- database: ena
- NCBI tax ID: 1915388
Genome sequences
- @ref: 67770
- description: Achromobacter sp. KAs 3-5
- accession: GCA_001975485
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 1915388
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| flagellated | no | 61.05 | no |
| flagellated | no | 61.05 | no |
| gram-positive | no | 98.252 | no |
| gram-positive | no | 98.252 | no |
| anaerobic | no | 98.615 | no |
| anaerobic | no | 98.615 | no |
| aerobic | yes | 92.077 | no |
| aerobic | yes | 92.077 | no |
| halophile | no | 84.657 | no |
| halophile | no | 84.657 | no |
| spore-forming | no | 96.283 | no |
| spore-forming | no | 96.283 | no |
| glucose-util | no | 64.417 | no |
| glucose-util | no | 64.417 | no |
| thermophile | no | 99.446 | yes |
| thermophile | no | 99.446 | yes |
| motile | yes | 87.234 | no |
| motile | yes | 87.234 | no |
| glucose-ferment | no | 88.291 | no |
| glucose-ferment | no | 88.291 | no |
External links
@ref: 67770
culture collection no.: JCM 31426, MCC 2980, MTCC 12117
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |