General

@ref: 67770

BacDive-ID: 164029

keywords: 16S sequence, Bacteria, mesophilic

description: Gracilibacillus kimchii JCM 31344 is a mesophilic bacterium that was isolated from Kimchi .

NCBI tax id

• NCBI tax id: 1686214
• Matching level: species

strain history

• @ref: 67770
• history: H.-J. Choi; World Inst. of Kimuchi, South Korea; K7.

doi: 10.13145/bacdive164029.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Bacilli
• order: Caryophanales
• family: Bacillaceae
• genus: Gracilibacillus
• species: Gracilibacillus kimchii
• full scientific name: Gracilibacillus kimchii Oh et al. 2021

@ref: 67770

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Bacillaceae

genus: Gracilibacillus

species: Gracilibacillus kimchii

full scientific name: Gracilibacillus kimchii Oh et al. 2021

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 37

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Kimchi (Korean fermented food)
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_5836.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_2444;97_3439;98_4339;99_5836&stattab=map
• Last taxonomy: Gracilibacillus
• 16S sequence: KP866223
• Sequence Identity:
• Total samples: 43
• soil counts: 10
• aquatic counts: 6
• animal counts: 22
• plant counts: 5

Sequence information

16S sequences

• @ref: 67770
• description: Gracilibacillus kimchii 16S ribosomal RNA gene, partial sequence
• accession: KP866223
• length: 1383
• database: nuccore
• NCBI tax ID: 1686214

GC content

• @ref: 67770
• GC-content: 37.7
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 31344, KACC 18669

literature

• topic: Phylogeny
• Pubmed-ID: 27572507
• title: Gracilibacillus kimchii sp. nov., a halophilic bacterium isolated from kimchi.
• authors: Oh YJ, Lee HW, Lim SK, Kwon MS, Lee J, Jang JY, Park HW, Nam YD, Seo MJ, Choi HJ
• journal: J Microbiol
• DOI: 10.1007/s12275-016-6349-4
• year: 2016
• mesh: Bacillaceae/classification/genetics/*isolation & purification/metabolism, Base Composition, Brassica/metabolism/*microbiology, Fatty Acids/metabolism, Fermentation, Phylogeny, Sodium Chloride/*metabolism, Vegetables/metabolism/*microbiology
• topic2: Metabolism

Reference