Strain identifier

BacDive ID: 163972

Type strain: No

Species: Arthrobacter sp.

Strain history: W. Iwasaki; Dept. of Biol. Sci., Grad. Sch. of Sci., Univ. of Tokyo, Japan; Hiyo1.

NCBI tax ID(s): 1667 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 163972

keywords: genome sequence, Bacteria, mesophilic

description: Arthrobacter sp. JCM 31232 is a mesophilic bacterium that was isolated from Soil at Hiyoriyama, affected by the 2011 Great East Japan Earthquake tsunami.

NCBI tax id

  • NCBI tax id: 1667
  • Matching level: species

strain history

  • @ref: 67770
  • history: W. Iwasaki; Dept. of Biol. Sci., Grad. Sch. of Sci., Univ. of Tokyo, Japan; Hiyo1.

doi: 10.13145/bacdive163972.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Arthrobacter
  • species: Arthrobacter sp.
  • full scientific name: Arthrobacter Conn and Dimmick 1947 (Approved Lists 1980)

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Arthrobacter

species: Arthrobacter sp.

full scientific name: Arthrobacter sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Soil at Hiyoriyama, affected by the 2011 Great East Japan Earthquake tsunami
  • geographic location: Sendai, Miyagi Pref.
  • country: Japan
  • origin.country: JPN
  • continent: Asia

Sequence information

Genome sequences

  • @ref: 67770
  • description: Arthrobacter sp. Hiyo1
  • accession: GCA_001263615
  • assembly level: scaffold
  • database: ncbi
  • NCBI tax ID: 1588020

GC content

  • @ref: 67770
  • GC-content: 63.2
  • method: genome sequence analysis

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno50no
motileno50no
flagellatedno94.129no
flagellatedno94.129no
gram-positiveyes87.811no
gram-positiveyes87.811no
anaerobicno99.265no
anaerobicno99.265no
aerobicyes96.28no
aerobicyes96.28no
halophileno90.608no
halophileno90.608no
spore-formingno92.837no
spore-formingno92.837no
thermophileno98.374yes
thermophileno98.374yes
glucose-utilyes85.171no
glucose-utilyes85.171no
glucose-fermentno84.451no
glucose-fermentno84.451no

External links

@ref: 67770

culture collection no.: JCM 31232

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/