Strain identifier

BacDive ID: 163957

Type strain: Yes

Species: Thalassiella azotivora

Strain history: T. Seo; Dept. of Life Sci., Dongguk Univ., South Korea; DSD2.

NCBI tax ID(s): 1720260 (species)

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General

@ref: 67770

BacDive-ID: 163957

keywords: 16S sequence, Bacteria, mesophilic

description: Thalassiella azotivora JCM 31134 is a mesophilic bacterium that was isolated from Seawater from Sadong wharf.

NCBI tax id

  • NCBI tax id: 1720260
  • Matching level: species

strain history

  • @ref: 67770
  • history: T. Seo; Dept. of Life Sci., Dongguk Univ., South Korea; DSD2.

doi: 10.13145/bacdive163957.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kineosporiales
  • family: Kineosporiaceae
  • genus: Thalassiella
  • species: Thalassiella azotivora
  • full scientific name: Thalassiella azotivora corrig. Lee et al. 2017

  • synonyms

    • @ref: 20215
    • synonym: Thalassiella azotovora

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Kineosporiales

family: Kineosporiaceae

genus: Thalassiella

species: Thalassiella azotivora

full scientific name: Thalassiella azotivora Lee et al. 2017

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-8(H2), MK-9(H4)

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Seawater from Sadong wharf
  • geographic location: Ulleung Island
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_70013.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_6608;97_37887;98_49152;99_70013&stattab=map
  • Last taxonomy: Thalassiella azotivora subclade
  • 16S sequence: KT630890
  • Sequence Identity:
  • Total samples: 1322
  • soil counts: 576
  • aquatic counts: 179
  • animal counts: 349
  • plant counts: 218

Sequence information

16S sequences

  • @ref: 67770
  • description: Thalassiella azotivora strain DSD2 16S ribosomal RNA gene, partial sequence
  • accession: KT630890
  • length: 1466
  • database: nuccore
  • NCBI tax ID: 1720260

GC content

  • @ref: 67770
  • GC-content: 73.21
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 31134, KCTC 39634

literature

  • topic: Phylogeny
  • Pubmed-ID: 27502175
  • title: Thalassiella azotovora gen. nov., sp. nov., a New Member of the Family Kineosporiaceae Isolated from Sea Water in South Korea.
  • authors: Lee D, Jang JH, Cha S, Seo T
  • journal: Curr Microbiol
  • DOI: 10.1007/s00284-016-1112-y
  • year: 2016
  • mesh: Actinomycetales/classification/genetics/*isolation & purification/metabolism, Base Composition, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/chemistry/metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Seawater/*microbiology
  • topic2: Metabolism

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/