Strain identifier
BacDive ID: 163946
Type strain: 
Species: Celeribacter ethanolicus
Strain history: Y. Wu; Second Inst. of Oceanogr., State Oceanic Admin., China; NH195.
NCBI tax ID(s): 1758178 (species)
General
@ref: 67770
BacDive-ID: 163946
keywords: genome sequence, 16S sequence, Bacteria, mesophilic, Gram-negative
description: Celeribacter ethanolicus JCM 31095 is a mesophilic, Gram-negative bacterium that was isolated from Seawater of the South China Sea.
NCBI tax id
- NCBI tax id: 1758178
- Matching level: species
strain history
- @ref: 67770
- history: Y. Wu; Second Inst. of Oceanogr., State Oceanic Admin., China; NH195.
doi: 10.13145/bacdive163946.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodobacterales
- family: Roseobacteraceae
- genus: Celeribacter
- species: Celeribacter ethanolicus
- full scientific name: Celeribacter ethanolicus Jian et al. 2016
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodobacterales
family: Rhodobacteraceae
genus: Celeribacter
species: Celeribacter ethanolicus
full scientific name: Celeribacter ethanolicus Jian et al. 2016
type strain: yes
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 97.8
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 90.641
observation
- @ref: 67770
- observation: quinones: Q-10
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Seawater of the South China Sea
taxonmaps
- @ref: 69479
- File name: preview.99_3975.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_1423;97_1699;98_2073;99_3975&stattab=map
- Last taxonomy: Celeribacter ethanolicus
- 16S sequence: KT852989
- Sequence Identity:
- Total samples: 209
- soil counts: 3
- aquatic counts: 198
- animal counts: 8
Sequence information
16S sequences
- @ref: 67770
- description: Celeribacter ethanolicus strain NH195 16S ribosomal RNA gene, partial sequence
- accession: KT852989
- length: 1455
- database: nuccore
- NCBI tax ID: 1758178
Genome sequences
- @ref: 67770
- description: Celeribacter ethanolicus NH195
- accession: GCA_001550095
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 1758178
GC content
- @ref: 67770
- GC-content: 61.3
- method: genome sequence analysis
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.8 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 93.503 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 82.283 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 90.641 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 95.955 | no |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 55.122 | no |
External links
@ref: 67770
culture collection no.: JCM 31095, CGMCC 1.15406
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |