General

@ref: 67770

BacDive-ID: 163867

DSM-Number: 29477

keywords: 16S sequence, Bacteria, mesophilic

description: Paenibacillus panaciterrae JCM 30744 is a mesophilic bacterium that was isolated from Soil of a ginseng field.

NCBI tax id

• NCBI tax id: 1510164
• Matching level: species

strain history

• @ref: 67770
• history: D.-C. Yang and Y.-J. Kim; Kyung-Hee Univ., South Korea; DCY95.

doi: 10.13145/bacdive163867.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Bacilli
• order: Caryophanales
• family: Paenibacillaceae
• genus: Paenibacillus
• species: Paenibacillus panaciterrae
• full scientific name: Paenibacillus panaciterrae Nguyen et al. 2015

@ref: 67770

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus panaciterrae

full scientific name: Paenibacillus panaciterrae Nguyen et al. 2015

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Soil of a ginseng field
• geographic location: Quang Nam Province
• country: Vietnam
• origin.country: VNM
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_127112.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_11793;97_28695;98_36581;99_127112&stattab=map
• Last taxonomy: Paenibacillus panaciterrae subclade
• 16S sequence: KJ653225
• Sequence Identity:
• Total samples: 184
• soil counts: 170
• aquatic counts: 5
• animal counts: 7
• plant counts: 2

Sequence information

16S sequences

• @ref: 67770
• description: Paenibacillus panaciterrae strain DCY95 16S ribosomal RNA gene, partial sequence
• accession: KJ653225
• length: 1465
• database: nuccore
• NCBI tax ID: 1510164

GC content

• @ref: 67770
• GC-content: 59.8-61.6
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 30744, DSM 29477, KCTC 33581

literature

• topic: Phylogeny
• Pubmed-ID: 26294902
• title: Paenibacillus panaciterrae sp. nov., isolated from ginseng-cultivated soil.
• authors: Nguyen NL, Kim YJ, Hoang VA, Kang JP, Singh P, Yang DC
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.000540
• year: 2015
• mesh: Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Genes, Bacterial, Nucleic Acid Hybridization, Paenibacillus/*classification/genetics/isolation & purification, Panax/*microbiology, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vietnam, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Transcriptome

Reference