Strain identifier
BacDive ID: 163820
Type strain: 
Species: Pantoea sp.
Strain history: T. Fukatsu; Natl. Inst. of Adv. Industr. Sci. & Technol., Japan; 26MAT2148.
NCBI tax ID(s): 69393 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 163820
keywords: 16S sequence, Bacteria, mesophilic
description: Pantoea sp. JCM 30570 is a mesophilic bacterium that was isolated from Brown-winged green stinkbug Plautia stali collected at Ishigaki island.
NCBI tax id
- NCBI tax id: 69393
- Matching level: species
strain history
- @ref: 67770
- history: T. Fukatsu; Natl. Inst. of Adv. Industr. Sci. & Technol., Japan; 26MAT2148.
doi: 10.13145/bacdive163820.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Erwiniaceae
- genus: Pantoea
- species: Pantoea sp.
- full scientific name: Pantoea Gavini et al. 1989
synonyms
- @ref: 20215
- synonym: Kalamiella
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Erwiniaceae
genus: Pantoea
species: Pantoea sp.
full scientific name: Pantoea sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Brown-winged green stinkbug Plautia stali (Insect sample ID Ps-ISGKf53) collected at Ishigaki island
- host species: Plautia stali
- geographic location: Okinawa
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_974.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_6;96_7;97_651;98_760;99_974&stattab=map
- Last taxonomy: Pantoea
- 16S sequence: LC007809
- Sequence Identity:
- Total samples: 13169
- soil counts: 878
- aquatic counts: 1633
- animal counts: 8308
- plant counts: 2350
Sequence information
16S sequences
- @ref: 67770
- description: Gamma proteobacterium symbiont of Plautia stali gene for 16S ribosomal RNA, partial sequence, strain: C/Ps-ISGKf53
- accession: LC007809
- length: 1464
- database: ena
- NCBI tax ID: 1563632
External links
@ref: 67770
culture collection no.: JCM 30570
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |