General

@ref: 67770

BacDive-ID: 163793

keywords: 16S sequence, Bacteria

description: Sphingobacterium mucilaginosum JCM 30424 is a bacterium that was isolated from Rhizosphere soil of a rose in Shangqiu.

NCBI tax id

• NCBI tax id: 1591124
• Matching level: species

strain history

• @ref: 67770
• history: T.-H. Yi; Kyung Hee Univ., South Korea; THG-SQA8.

doi: 10.13145/bacdive163793.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacteroidota
• domain: Bacteria
• phylum: Bacteroidota
• class: Sphingobacteriia
• order: Sphingobacteriales
• family: Sphingobacteriaceae
• genus: Sphingobacterium
• species: Sphingobacterium mucilaginosum
• full scientific name: Sphingobacterium mucilaginosum Du et al. 2015

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Sphingobacteriia

order: Sphingobacteriales

family: Sphingobacteriaceae

genus: Sphingobacterium

species: Sphingobacterium mucilaginosum

full scientific name: Sphingobacterium mucilaginosum Du et al. 2015

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Rhizosphere soil of a rose in Shangqiu
• country: China
• origin.country: CHN
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Sphingobacterium mucilaginosum strain THG-SQA8 16S ribosomal RNA gene, partial sequence
• accession: KM598234
• length: 1441
• database: nuccore
• NCBI tax ID: 1591124

GC content

• @ref: 67770
• GC-content: 40.7
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 30424, CCTCC AB 2014317, KCTC 42503

literature

• topic: Phylogeny
• Pubmed-ID: 26023207
• title: Sphingobacterium mucilaginosum sp. nov., isolated from rhizosphere soil of a rose.
• authors: Du J, Singh H, Won K, Yang JE, Jin FX, Yi TH
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.000361
• year: 2015
• mesh: Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Phosphatidylethanolamines/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Rosa/*microbiology, Sequence Analysis, DNA, *Soil Microbiology, Sphingobacterium/*classification/genetics/isolation & purification, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Genetics

Reference