Strain identifier
BacDive ID: 163698
Type strain: 
Species: Paenibacillus sp.
Strain history: B. K. C. Patel; Griffith Univ., Australia; P1XP2.
NCBI tax ID(s): 58172 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 163698
keywords: genome sequence, Bacteria, thermophilic
description: Paenibacillus sp. JCM 30052 is a thermophilic bacterium that was isolated from Commercial bioreactor degrading food waste.
NCBI tax id
- NCBI tax id: 58172
- Matching level: species
strain history
- @ref: 67770
- history: B. K. C. Patel; Griffith Univ., Australia; P1XP2.
doi: 10.13145/bacdive163698.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus sp.
- full scientific name: Paenibacillus Ash et al. 1994
synonyms
- @ref: 20215
- synonym: Aerobacillus
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus sp.
full scientific name: Paenibacillus sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 45
- range: thermophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Commercial bioreactor degrading food waste
Sequence information
Genome sequences
- @ref: 67770
- description: Paenibacillus sp. P1XP2
- accession: GCA_000787385
- assembly level: contig
- database: ncbi
- NCBI tax ID: 1472719
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 89.243 | no |
| flagellated | yes | 63.745 | no |
| gram-positive | yes | 77.575 | no |
| anaerobic | no | 98.211 | no |
| aerobic | yes | 82.018 | no |
| halophile | no | 90.324 | no |
| spore-forming | yes | 96.944 | no |
| thermophile | no | 97.881 | yes |
| glucose-util | yes | 88.346 | no |
| glucose-ferment | no | 86.384 | no |
External links
@ref: 67770
culture collection no.: JCM 30052, KCTC 33553
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |