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Strain identifier

BacDive ID: 163643

Type strain: No

Species: Bacillus sp.

Strain history: K. Okada and J. Sugiyama; Tokyo Natl. Res. Inst. for Cult. Prop. and TechnoSuruga Lab. Co., Ltd., Japan; T7528-11-2b.

NCBI tax ID(s): 1868421 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 7.1 (current version):
version 7:
version 6:
version 7.1 (current version)

General

@ref: 67770

BacDive-ID: 163643

keywords: 16S sequence, Bacteria, mesophilic

description: Bacillus sp. JCM 28838 is a mesophilic bacterium that was isolated from Black substances behind the east wall 1 of the Takamatsuzuka Tumulus.

NCBI tax id

  • NCBI tax id: 1868421
  • Matching level: species

strain history: K. Okada and J. Sugiyama; Tokyo Natl. Res. Inst. for Cult. Prop. and TechnoSuruga Lab. Co., Ltd., Japan; T7528-11-2b.

doi: 10.13145/bacdive163643.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus sp.
  • full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Quasibacillus
    20215Pseudobacillus
    20215Maribacillus

@ref: 67770

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Bacillaceae

genus: Bacillus

species: Bacillus sp.

full scientific name: Bacillus sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Black substances behind the east wall 1 (during relocation of the stone chamber) of the Takamatsuzuka Tumulus
  • geographic location: Asuka Village, Nara Pref.
  • country: Japan
  • origin.country: JPN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_583.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_370;97_418;98_477;99_583&stattab=map
  • Last taxonomy: Peribacillus
  • 16S sequence: LC150676
  • Sequence Identity:
  • Total samples: 10636
  • soil counts: 6241
  • aquatic counts: 1051
  • animal counts: 2464
  • plant counts: 880

Sequence information

16S sequences

  • @ref: 67770
  • description: Bacillus sp. JCM 28838 gene for 16S ribosomal RNA, partial sequence, strain: T7528-11-2b
  • accession: LC150676
  • length: 1511
  • database: ena
  • NCBI tax ID: 1868421

External links

@ref: 67770

culture collection no.: JCM 28838

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/