Strain identifier

BacDive ID: 16348

Type strain: Yes

Species: Streptomyces thermogriseus

Strain Designation: Y-14046

Strain history: DSM 41756 <-- C.-L. Jiang Y-14046.

NCBI tax ID(s): 75292 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 10549

BacDive-ID: 16348

DSM-Number: 41756

keywords: 16S sequence, Bacteria, thermophilic

description: Streptomyces thermogriseus Y-14046 is a thermophilic bacterium that was isolated from hot spring.

NCBI tax id

  • NCBI tax id: 75292
  • Matching level: species

strain history

@refhistory
10549<- C.-L. Jiang; Y-14046
67770DSM 41756 <-- C.-L. Jiang Y-14046.

doi: 10.13145/bacdive16348.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces thermogriseus
  • full scientific name: Streptomyces thermogriseus Xu et al. 1998

@ref: 10549

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces thermogriseus

full scientific name: Streptomyces thermogriseus Xu et al. 1998

strain designation: Y-14046

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
10549GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10549GPHF-MEDIUM (DSMZ Medium 553)yeshttps://mediadive.dsmz.de/medium/553Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
10549positivegrowth50thermophilic
67770positivegrowth50thermophilic

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
10549hot springYunnan, EryuanChinaCHNAsia
67770Hot springEryuan, YunnanChinaCHNAsia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Thermal spring
#Condition#Thermophilic (>45°C)

taxonmaps

  • @ref: 69479
  • File name: preview.99_22203.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_3771;97_13597;98_16747;99_22203&stattab=map
  • Last taxonomy: Streptomyces
  • 16S sequence: AB249980
  • Sequence Identity:
  • Total samples: 9705
  • soil counts: 2719
  • aquatic counts: 1004
  • animal counts: 4416
  • plant counts: 1566

Safety information

risk assessment

  • @ref: 10549
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces thermogriseus gene for 16S rRNA, partial sequence, strain: NBRC 100772AB2499801463ena75292
20218Streptomyces thermogriseus strain CCTCC AA97014 16S ribosomal RNA gene, partial sequenceAF0567141540ena75292

External links

@ref: 10549

culture collection no.: DSM 41756, CCTCC AA 97014, JCM 11269, NBRC 100772, NRRL B-24322

straininfo link

  • @ref: 85403
  • straininfo: 50103

literature

  • topic: Phylogeny
  • Pubmed-ID: 9828410
  • title: Streptomyces thermogriseus, a new species of the genus Streptomyces from soil, lake and hot-spring.
  • authors: Xu LH, Tiang YQ, Zhang YF, Zhao LX, Jiang CL
  • journal: Int J Syst Bacteriol
  • DOI: 10.1099/00207713-48-4-1089
  • year: 1998
  • mesh: China, DNA, Bacterial/chemistry, Electrophoresis, Polyacrylamide Gel, *Fresh Water, Genes, rRNA, Isoenzymes/analysis/isolation & purification, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity, Streptomyces/*classification/growth & development/*isolation & purification, Terminology as Topic, *Water Microbiology
  • topic2: Enzymology

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
10549Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41756)https://www.dsmz.de/collection/catalogue/details/culture/DSM-41756
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
85403Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID50103.1StrainInfo: A central database for resolving microbial strain identifiers