Strain identifier

BacDive ID: 16346

Type strain: Yes

Species: Streptomyces thermoalcalitolerans

Strain Designation: TA56

Strain history: DSM 41741 <-- M. Goodfellow TA56 <-- N. Sahin.

NCBI tax ID(s): 65605 (species)

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General

@ref: 10520

BacDive-ID: 16346

DSM-Number: 41741

keywords: 16S sequence, Bacteria, thermophilic

description: Streptomyces thermoalcalitolerans TA56 is a thermophilic bacterium that was isolated from garden soil.

NCBI tax id

  • NCBI tax id: 65605
  • Matching level: species

strain history

@refhistory
10520<- M. Goodfellow; TA56
67770DSM 41741 <-- M. Goodfellow TA56 <-- N. Sahin.

doi: 10.13145/bacdive16346.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces thermoalcalitolerans
  • full scientific name: Streptomyces thermoalcalitolerans Kim et al. 1999

@ref: 10520

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces thermoalcalitolerans

full scientific name: Streptomyces thermoalcalitolerans Kim et al. 1999

strain designation: TA56

type strain: yes

Morphology

multimedia

  • @ref: 10520
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_41741.jpg
  • caption: Medium 65 45°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
10520GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10520ISP MEDIUM 4 (DSMZ Medium 547)yeshttps://mediadive.dsmz.de/medium/547Name: ISP MEDIUM 4 (DSMZ Medium 547) Composition: Agar 19.98 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999002 g/l MgSO4 x 7 H2O 0.999002 g/l NaCl 0.999002 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water
10520ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://mediadive.dsmz.de/medium/84Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
10520positivegrowth45thermophilic
67770positivegrowth45thermophilic

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-9(H8)

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
10520garden soilYogyakartaIndonesiaIDNAsia
67770Garden soilYogyakartaIndonesiaIDNAsia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Engineered#Agriculture#Garden

Safety information

risk assessment

  • @ref: 10520
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces thermoalcalitolerans gene for 16S rRNA, partial sequence, strain: NBRC 16322AB2499091485ena65605
10520Streptomyces thermoalkalitolerans DNA for 16S ribosomal RNAAJ0002841286ena65605

GC content

@refGC-contentmethod
1052073
6777073high performance liquid chromatography (HPLC)

External links

@ref: 10520

culture collection no.: DSM 41741, CIP 109044, IFO 16322, JCM 10673, NBRC 16322, KCTC 9936

straininfo link

  • @ref: 85401
  • straininfo: 50093

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
10520Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41741)https://www.dsmz.de/collection/catalogue/details/culture/DSM-41741
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
85401Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID50093.1StrainInfo: A central database for resolving microbial strain identifiers