Strain identifier
BacDive ID: 163445
Type strain: 
Species: Olivibacter sp.
Strain history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T6220-7-2b.
NCBI tax ID(s): 1818670 (species)
General
@ref: 67770
BacDive-ID: 163445
keywords: 16S sequence, Bacteria, mesophilic
description: Olivibacter sp. JCM 28250 is a mesophilic bacterium that was isolated from Spots on the paintings of the group of women on the west wall in the stone chamber.
NCBI tax id
- NCBI tax id: 1818670
- Matching level: species
strain history
- @ref: 67770
- history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T6220-7-2b.
doi: 10.13145/bacdive163445.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Sphingobacteriia
- order: Sphingobacteriales
- family: Sphingobacteriaceae
- genus: Olivibacter
- species: Olivibacter sp.
- full scientific name: Olivibacter Ntougias et al. 2007
synonyms
- @ref: 20215
- synonym: Pseudosphingobacterium
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Sphingobacteriia
order: Sphingobacteriales
family: Sphingobacteriaceae
genus: Olivibacter
species: Olivibacter sp.
full scientific name: Olivibacter sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Spots on the paintings of the group of women on the west wall in the stone chamber
- geographic location: Takamatsuzuka Tumulus, Asuka Village, Nara Pref.
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_18858.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15793;96_9620;97_11588;98_14250;99_18858&stattab=map
- Last taxonomy: Olivibacter soli
- 16S sequence: LC133597
- Sequence Identity:
- Total samples: 1126
- soil counts: 595
- aquatic counts: 23
- animal counts: 94
- plant counts: 414
Sequence information
16S sequences
- @ref: 67770
- description: Olivibacter sp. JCM 28250 gene for 16S ribosomal RNA, partial sequence
- accession: LC133597
- length: 1482
- database: nuccore
- NCBI tax ID: 1818670
External links
@ref: 67770
culture collection no.: JCM 28250
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |