Strain identifier
BacDive ID: 163108
Type strain:
Species: Lacticaseibacillus casei
Strain history: ATCC 4913 <-- E. B. Fred LD-3 (Lactobacillus delbrueckii) <-- E. Pribram strain III <-- Henneberg.
NCBI tax ID(s): 1582 (species)
General
@ref: 67770
BacDive-ID: 163108
keywords: 16S sequence, Bacteria, mesophilic
description: Lacticaseibacillus casei JCM 2120 is a mesophilic bacterium of the family Lactobacillaceae.
NCBI tax id
- NCBI tax id: 1582
- Matching level: species
strain history
- @ref: 67770
- history: ATCC 4913 <-- E. B. Fred LD-3 (Lactobacillus delbrueckii) <-- E. Pribram strain III <-- Henneberg.
doi: 10.13145/bacdive163108.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Lacticaseibacillus
- species: Lacticaseibacillus casei
- full scientific name: Lacticaseibacillus casei (Orla-Jensen 1916) Zheng et al. 2020
synonyms
@ref synonym 20215 Lactobacillus casei 20215 Caseobacterium vulgare
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Lacticaseibacillus
species: Lacticaseibacillus casei
full scientific name: Lacticaseibacillus casei (Orla-Jensen 1916) Zheng et al. 2020
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_113.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_45;96_88;97_93;98_102;99_113&stattab=map
- Last taxonomy: Lactobacillaceae
- 16S sequence: AB690248
- Sequence Identity:
- Total samples: 44444
- soil counts: 1801
- aquatic counts: 2397
- animal counts: 39363
- plant counts: 883
Sequence information
16S sequences
- @ref: 67770
- description: Lactobacillus casei gene for 16S rRNA, partial sequence, strain: JCM 2120
- accession: AB690248
- length: 1522
- database: ena
- NCBI tax ID: 1582
External links
@ref: 67770
culture collection no.: JCM 2120, ATCC 4913
straininfo link
- @ref: 113875
- straininfo: 3261
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
113875 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID3261.1 |