Strain identifier

BacDive ID: 163090

Type strain: No

Species: Acetobacter sicerae

Strain history: IAM 14349 <-- ATCC 23747 <-- NCIMB 8940 <-- J. G. Carr Ac 142.

NCBI tax ID(s): 85325 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 163090

keywords: 16S sequence, Bacteria, mesophilic, polysaccharide production

description: Acetobacter sicerae JCM 21163 is a mesophilic bacterium that produces polysaccharides and was isolated from Cider.

NCBI tax id

  • NCBI tax id: 85325
  • Matching level: species

strain history

  • @ref: 67770
  • history: IAM 14349 <-- ATCC 23747 <-- NCIMB 8940 <-- J. G. Carr Ac 142.

doi: 10.13145/bacdive163090.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Acetobacteraceae
  • genus: Acetobacter
  • species: Acetobacter sicerae
  • full scientific name: Acetobacter sicerae Li et al. 2014

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodospirillales

family: Acetobacteraceae

genus: Acetobacter

species: Acetobacter sicerae

full scientific name: Acetobacter sicerae Li et al. 2014

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 25

Physiology and metabolism

compound production

  • @ref: 67770
  • compound: Soft-cellulose

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Cider

taxonmaps

  • @ref: 69479
  • File name: preview.99_2615.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_29;96_152;97_827;98_2025;99_2615&stattab=map
  • Last taxonomy: Acetobacter
  • 16S sequence: KJ147511
  • Sequence Identity:
  • Total samples: 888
  • soil counts: 133
  • aquatic counts: 132
  • animal counts: 499
  • plant counts: 124

Sequence information

16S sequences

  • @ref: 67770
  • description: Acetobacter sicerae strain LMG 1530 16S ribosomal RNA gene, partial sequence
  • accession: KJ147511
  • length: 1454
  • database: nuccore
  • NCBI tax ID: 85325

External links

@ref: 67770

culture collection no.: JCM 21163, ATCC 23747, IAM 14349, LMG 1530, NCIMB 8940

straininfo link

  • @ref: 113857
  • straininfo: 20

literature

  • topic: Phylogeny
  • Pubmed-ID: 24763601
  • title: Acetobacter sicerae sp. nov., isolated from cider and kefir, and identification of species of the genus Acetobacter by dnaK, groEL and rpoB sequence analysis.
  • authors: Li L, Wieme A, Spitaels F, Balzarini T, Nunes OC, Manaia CM, Van Landschoot A, De Vuyst L, Cleenwerck I, Vandamme P
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.058354-0
  • year: 2014
  • mesh: Acetobacter/*classification/genetics/isolation & purification, Alcoholic Beverages/*microbiology, Amplified Fragment Length Polymorphism Analysis, Bacterial Typing Techniques, Base Composition, Cultured Milk Products/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Random Amplified Polymorphic DNA Technique, Sequence Analysis, DNA, Ubiquinone/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
113857Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID20.1