Strain identifier
BacDive ID: 163090
Type strain:
Species: Acetobacter sicerae
Strain history: IAM 14349 <-- ATCC 23747 <-- NCIMB 8940 <-- J. G. Carr Ac 142.
NCBI tax ID(s): 85325 (species)
General
@ref: 67770
BacDive-ID: 163090
keywords: 16S sequence, Bacteria, mesophilic, polysaccharide production
description: Acetobacter sicerae JCM 21163 is a mesophilic bacterium that produces polysaccharides and was isolated from Cider.
NCBI tax id
- NCBI tax id: 85325
- Matching level: species
strain history
- @ref: 67770
- history: IAM 14349 <-- ATCC 23747 <-- NCIMB 8940 <-- J. G. Carr Ac 142.
doi: 10.13145/bacdive163090.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Acetobacteraceae
- genus: Acetobacter
- species: Acetobacter sicerae
- full scientific name: Acetobacter sicerae Li et al. 2014
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Acetobacteraceae
genus: Acetobacter
species: Acetobacter sicerae
full scientific name: Acetobacter sicerae Li et al. 2014
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
Physiology and metabolism
compound production
- @ref: 67770
- compound: Soft-cellulose
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Cider
taxonmaps
- @ref: 69479
- File name: preview.99_2615.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_29;96_152;97_827;98_2025;99_2615&stattab=map
- Last taxonomy: Acetobacter
- 16S sequence: KJ147511
- Sequence Identity:
- Total samples: 888
- soil counts: 133
- aquatic counts: 132
- animal counts: 499
- plant counts: 124
Sequence information
16S sequences
- @ref: 67770
- description: Acetobacter sicerae strain LMG 1530 16S ribosomal RNA gene, partial sequence
- accession: KJ147511
- length: 1454
- database: nuccore
- NCBI tax ID: 85325
External links
@ref: 67770
culture collection no.: JCM 21163, ATCC 23747, IAM 14349, LMG 1530, NCIMB 8940
straininfo link
- @ref: 113857
- straininfo: 20
literature
- topic: Phylogeny
- Pubmed-ID: 24763601
- title: Acetobacter sicerae sp. nov., isolated from cider and kefir, and identification of species of the genus Acetobacter by dnaK, groEL and rpoB sequence analysis.
- authors: Li L, Wieme A, Spitaels F, Balzarini T, Nunes OC, Manaia CM, Van Landschoot A, De Vuyst L, Cleenwerck I, Vandamme P
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.058354-0
- year: 2014
- mesh: Acetobacter/*classification/genetics/isolation & purification, Alcoholic Beverages/*microbiology, Amplified Fragment Length Polymorphism Analysis, Bacterial Typing Techniques, Base Composition, Cultured Milk Products/*microbiology, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Random Amplified Polymorphic DNA Technique, Sequence Analysis, DNA, Ubiquinone/chemistry
- topic2: Transcriptome
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
113857 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID20.1 |