Strain identifier

BacDive ID: 163003

Type strain: No

Species: Arthrobacter sp.

Strain history: IAM 13128 <-- ATCC 13330 <-- M. P. Starr TP2.

NCBI tax ID(s): 1667 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 163003

keywords: Bacteria, mesophilic, Gram-positive

description: Arthrobacter sp. JCM 20844 is a mesophilic, Gram-positive bacterium that was isolated from Stem gall on Douglas fir .

NCBI tax id

  • NCBI tax id: 1667
  • Matching level: species

strain history

  • @ref: 67770
  • history: IAM 13128 <-- ATCC 13330 <-- M. P. Starr TP2.

doi: 10.13145/bacdive163003.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Arthrobacter
  • species: Arthrobacter sp.
  • full scientific name: Arthrobacter Conn and Dimmick 1947 (Approved Lists 1980)

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Arthrobacter

species: Arthrobacter sp.

full scientific name: Arthrobacter sp.

type strain: no

Morphology

cell morphology

@refgram stainconfidencemotility
69480positive100
6948095.17no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

spore formation

@refspore formationconfidence
69480no99.99
69481no100

observation

  • @ref: 67770
  • observation: quinones: MK-9(H2)

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Stem gall on Douglas fir (Pseudotsuga menziesii)
  • host species: Pseudotsuga menziesii

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno94.024no
flagellatedno96.067no
gram-positiveyes93.558no
anaerobicno93.804no
aerobicno96.471no
halophileyes75.558no
spore-formingno92.761no
glucose-utilyes86.362no
thermophileno98.716yes
glucose-fermentyes85.643no

External links

@ref: 67770

culture collection no.: JCM 20844, ATCC 13330, IAM 13128, LMG 137

straininfo link

  • @ref: 113772
  • straininfo: 6555

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
113772Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID6555.1