Strain identifier
BacDive ID: 162906
Type strain: 
Species: Acetobacter pasteurianus
Strain history: IAM 12073 <-- ATCC 9322 <-- NCTC 7113 <-- J. T. Walker.
NCBI tax ID(s): 438 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162906
keywords: genome sequence, Bacteria, mesophilic, Gram-negative
description: Acetobacter pasteurianus JCM 20384 is a mesophilic, Gram-negative bacterium that was isolated from Sour beer.
NCBI tax id
- NCBI tax id: 438
- Matching level: species
strain history
- @ref: 67770
- history: IAM 12073 <-- ATCC 9322 <-- NCTC 7113 <-- J. T. Walker.
doi: 10.13145/bacdive162906.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Acetobacteraceae
- genus: Acetobacter
- species: Acetobacter pasteurianus
- full scientific name: Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacterium ascendens 20215 Acetobacter ascendens 20215 Acetobacter pasteurianus subsp. paradoxus 20215 Acetobacter peroxydans 20215 Mycoderma pasteurianum 20215 Acetobacter paradoxus 20215 Acetobacter paradoxum 20215 Acetobacter pasteurianus subsp. ascendens
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Acetobacteraceae
genus: Acetobacter
species: Acetobacter pasteurianus
full scientific name: Acetobacter pasteurianus (Hansen 1879) Beijerinck and Folpmers 1916
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 99.999
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 99.995 |
| 69481 | no | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Sour beer
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Acetobacter malorum strain LMG 1604 | 178901.15 | wgs | patric | 178901 |
| 66792 | Acetobacter malorum LMG 1604 | 2728368911 | draft | img | 178901 |
| 67770 | Acetobacter malorum LMG 1604 | GCA_001581085 | contig | ncbi | 178901 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | yes | 71.28 | no |
| gram-positive | no | 96.581 | no |
| anaerobic | no | 98.411 | no |
| aerobic | yes | 85.795 | no |
| halophile | no | 94.286 | no |
| spore-forming | no | 94.583 | no |
| glucose-util | yes | 82.86 | no |
| flagellated | no | 84.345 | no |
| thermophile | no | 98.326 | yes |
| glucose-ferment | no | 88.49 | no |
External links
@ref: 67770
culture collection no.: JCM 20384, ATCC 9322, IAM 12073, LMG 1604, NCIMB 7113, NCTC 7113
straininfo link
- @ref: 113693
- straininfo: 14585
literature
- topic: Metabolism
- Pubmed-ID: 17453192
- title: Microbial asymmetric oxidation of 2-butyl-1,3-propanediol.
- authors: Mitsukura K, Uno T, Yoshida T, Nagasawa T
- journal: Appl Microbiol Biotechnol
- DOI: 10.1007/s00253-007-0974-0
- year: 2007
- mesh: Acetobacter/*metabolism, Biotransformation, Oxidation-Reduction, Propylene Glycol/*metabolism, Pseudomonas putida/*metabolism
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 |
| 113693 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID14585.1 |