Strain identifier
BacDive ID: 162842
Type strain: 
Species: Acetobacter aceti
Strain history: IAM 1814 <-- T. Asai A-15 ("Gluconobacter dioxyacetonicus") <-- Nakano Rice-vinegar Producing Co..
NCBI tax ID(s): 435 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162842
keywords: genome sequence, Bacteria, mesophilic, Gram-negative
description: Acetobacter aceti JCM 20276 is a mesophilic, Gram-negative bacterium of the family Acetobacteraceae.
NCBI tax id
- NCBI tax id: 435
- Matching level: species
strain history
- @ref: 67770
- history: IAM 1814 <-- T. Asai A-15 ("Gluconobacter dioxyacetonicus") <-- Nakano Rice-vinegar Producing Co..
doi: 10.13145/bacdive162842.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Acetobacteraceae
- genus: Acetobacter
- species: Acetobacter aceti
- full scientific name: Acetobacter aceti (Pasteur 1864) Beijerinck 1898 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Mycoderma aceti
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Acetobacteraceae
genus: Acetobacter
species: Acetobacter aceti
full scientific name: Acetobacter aceti (Pasteur 1864) Beijerinck 1898
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 99.998
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 99.998
observation
- @ref: 67770
- observation: quinones: Q-9
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Acetobacter aceti JCM20276 | GCA_014218315 | complete | ncbi | 435 |
| 66792 | Acetobacter aceti strain JCM20276 | 435.23 | complete | patric | 435 |
GC content
- @ref: 67770
- GC-content: 56.4
- method: high performance liquid chromatography (HPLC)
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 84 | no |
| flagellated | no | 64.973 | no |
| gram-positive | no | 96.342 | no |
| anaerobic | no | 98.634 | no |
| aerobic | yes | 92.827 | no |
| halophile | no | 90.186 | no |
| spore-forming | no | 95.089 | no |
| glucose-util | yes | 83.309 | no |
| thermophile | no | 96.12 | yes |
| motile | yes | 83.222 | no |
| glucose-ferment | no | 88.212 | no |
External links
@ref: 67770
culture collection no.: JCM 20276, IAM 1814, LMG 1372, LMG 1695
straininfo link
- @ref: 113646
- straininfo: 14537
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Enzymology | 32729375 | Characterization of a novel class of glyoxylate reductase belonging to the beta-hydroxyacid dehydrogenase family in Acetobacter aceti. | Kumsab J, Tobe R, Kurihara T, Hirose Y, Omori T, Mihara H | Biosci Biotechnol Biochem | 10.1080/09168451.2020.1797470 | 2020 | Acetobacter/*enzymology, Alcohol Oxidoreductases/chemistry/*metabolism, Amino Acid Sequence, Hydrogen-Ion Concentration, Kinetics, Metals/pharmacology, Phylogeny, Substrate Specificity | Phylogeny |
| Genetics | 33060273 | Complete Genome Sequence of an Acetic Acid Bacterium, Acetobacter aceti JCM20276. | Hirose Y, Kumsab J, Tobe R, Mihara H | Microbiol Resour Announc | 10.1128/MRA.00962-20 | 2020 |
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 113646 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID14537.1 |