Strain identifier

BacDive ID: 162779

Type strain: No

Species: Pseudomonas aeruginosa

Strain history: IAM 1271 <-- IFO 3445 <-- RIMD, HD.

NCBI tax ID(s): 287 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 162779

keywords: 16S sequence, Bacteria, mesophilic

description: Pseudomonas aeruginosa JCM 20138 is a mesophilic bacterium that was isolated from Urine.

NCBI tax id

  • NCBI tax id: 287
  • Matching level: species

strain history

  • @ref: 67770
  • history: IAM 1271 <-- IFO 3445 <-- RIMD, HD.

doi: 10.13145/bacdive162779.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas aeruginosa
  • full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacterium aeruginosum

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas aeruginosa

full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Urine

taxonmaps

  • @ref: 69479
  • File name: preview.99_42.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_36;97_37;98_40;99_42&stattab=map
  • Last taxonomy: Pseudomonas aeruginosa
  • 16S sequence: LC595313
  • Sequence Identity:
  • Total samples: 22757
  • soil counts: 1669
  • aquatic counts: 5046
  • animal counts: 14748
  • plant counts: 1294

Sequence information

16S sequences

  • @ref: 67770
  • description: Pseudomonas aeruginosa JCM:20138 gene for 16S rRNA, partial sequence
  • accession: LC595313
  • length: 1458
  • database: ena
  • NCBI tax ID: 287

External links

@ref: 67770

culture collection no.: JCM 20138, IAM 1271, IFO 3445, NBRC 3445, OUT 8230

straininfo link

  • @ref: 113596
  • straininfo: 62617

literature

  • Pubmed-ID: 3095613
  • title: Transformation by extracellular DNA produced by Pseudomonas aeruginosa.
  • authors: Muto Y, Goto S
  • journal: Microbiol Immunol
  • DOI: 10.1111/j.1348-0421.1986.tb02989.x
  • year: 1986
  • mesh: Chromosome Mapping, Chromosomes, Bacterial, DNA, Bacterial/*genetics, Escherichia coli/genetics, *Plasmids, Pseudomonas aeruginosa/*genetics, R Factors, *Transformation, Bacterial

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
113596Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID62617.1