Strain identifier

BacDive ID: 162760

Type strain: No

Species: Pseudomonas putida

Strain history: IAM 1218 <-- K. Yokozawa 38F.

NCBI tax ID(s): 303 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 162760

keywords: 16S sequence, Bacteria, mesophilic

description: Pseudomonas putida JCM 20111 is a mesophilic bacterium that was isolated from Fishpond.

NCBI tax id

  • NCBI tax id: 303
  • Matching level: species

strain history

  • @ref: 67770
  • history: IAM 1218 <-- K. Yokozawa 38F.

doi: 10.13145/bacdive162760.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas putida
  • full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Bacillus putidus
    20215Arthrobacter siderocapsulatus

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas putida

full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Fishpond

taxonmaps

  • @ref: 69479
  • File name: preview.99_185.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_61;97_89;98_98;99_185&stattab=map
  • Last taxonomy: Pseudomonas
  • 16S sequence: LC595303
  • Sequence Identity:
  • Total samples: 2464
  • soil counts: 833
  • aquatic counts: 448
  • animal counts: 521
  • plant counts: 662

Sequence information

16S sequences

  • @ref: 67770
  • description: Pseudomonas putida JCM:20111 gene for 16S rRNA, partial sequence
  • accession: LC595303
  • length: 1459
  • database: ena
  • NCBI tax ID: 303

External links

@ref: 67770

culture collection no.: JCM 20111, IAM 1218

straininfo link

  • @ref: 113579
  • straininfo: 218987

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
113579Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID218987.1