Strain identifier
BacDive ID: 162695
Type strain: 
Species: Vibrio metschnikovii
Strain history: IAM 1039 <-- RIMD, strain Todai.
NCBI tax ID(s): 28172 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162695
keywords: 16S sequence, Bacteria, mesophilic
description: Vibrio metschnikovii JCM 20020 is a mesophilic bacterium of the family Vibrionaceae.
NCBI tax id
- NCBI tax id: 28172
- Matching level: species
strain history
- @ref: 67770
- history: IAM 1039 <-- RIMD, strain Todai.
doi: 10.13145/bacdive162695.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Vibrionales
- family: Vibrionaceae
- genus: Vibrio
- species: Vibrio metschnikovii
- full scientific name: Vibrio metschnikovii Gamaleia 1888 (Approved Lists 1980)
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales
family: Vibrionaceae
genus: Vibrio
species: Vibrio metschnikovii
full scientific name: Vibrio metschnikovii Gamaleia 1888
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_4316.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_14;96_2166;97_2621;98_3248;99_4316&stattab=map
- Last taxonomy: Vibrio
- 16S sequence: LC571918
- Sequence Identity:
- Total samples: 316
- soil counts: 3
- aquatic counts: 73
- animal counts: 227
- plant counts: 13
Sequence information
16S sequences
- @ref: 67770
- description: Vibrio metschnikovii JCM 20020 gene for 16S rRNA, partial sequence
- accession: LC571918
- length: 1482
- database: ena
- NCBI tax ID: 28172
External links
@ref: 67770
culture collection no.: JCM 20020, IAM 1039
straininfo link
- @ref: 113526
- straininfo: 218856
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113526 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID218856.1 |