Strain identifier
BacDive ID: 162638
Type strain: 
Species: Bifidobacterium faecale
Strain history: G.-B. Kim CU3-7.
NCBI tax ID(s): 1454229 (species)
version 9.2 (current version)
General
@ref: 67770
BacDive-ID: 162638
keywords: 16S sequence, Bacteria, mesophilic
description: Bifidobacterium faecale JCM 19861 is a mesophilic bacterium that was isolated from Feces of a two-week-old baby.
NCBI tax id
- NCBI tax id: 1454229
- Matching level: species
strain history
- @ref: 67770
- history: G.-B. Kim CU3-7.
doi: 10.13145/bacdive162638.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium faecale
- full scientific name: Bifidobacterium faecale Choi et al. 2014
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium faecale
full scientific name: Bifidobacterium faecale Choi et al. 2014
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Feces of a two-week-old baby
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Bifidobacterium faecale strain CU3-7 16S ribosomal RNA gene, partial sequence | KF990498 | 1449 | nuccore | 1454229 |
| 67770 | Bifidobacterium faecale JCM 19861 gene for 16S rRNA, partial sequence | LC589222 | 1463 | nuccore | 1454229 |
GC content
- @ref: 67770
- GC-content: 58.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 19861, KACC 17904
literature
- topic: Phylogeny
- Pubmed-ID: 24944342
- title: Bifidobacterium faecale sp. nov., isolated from human faeces.
- authors: Choi JH, Lee KM, Lee MK, Cha CJ, Kim GB
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.063479-0
- year: 2014
- mesh: Aldehyde-Lyases/metabolism, Bacterial Typing Techniques, Base Composition, Bifidobacterium/*classification/genetics/isolation & purification, Chaperonin 60/genetics, DNA, Bacterial/genetics, Fatty Acids/chemistry, Feces/*microbiology, Humans, Infant, Newborn, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Pathogenicity
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |