General

@ref: 67770

BacDive-ID: 162575

keywords: 16S sequence, Bacteria, mesophilic

description: Rhodanobacter koreensis JCM 19614 is a mesophilic bacterium that was isolated from Tomato rhizosphere in Pyeongtaek.

NCBI tax id

• NCBI tax id: 1393054
• Matching level: species

strain history

• @ref: 67770
• history: T.-H. Yi THG-DD7.

doi: 10.13145/bacdive162575.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Gammaproteobacteria
• order: Lysobacterales
• family: Rhodanobacteraceae
• genus: Rhodanobacter
• species: Rhodanobacter koreensis
• full scientific name: Rhodanobacter koreensis Won et al. 2015

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Lysobacterales

family: Rhodanobacteraceae

genus: Rhodanobacter

species: Rhodanobacter koreensis

full scientific name: Rhodanobacter koreensis Won et al. 2015

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 28

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Tomato rhizosphere in Pyeongtaek
• geographic location: Gyeonggi-Do
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

Sequence information

16S sequences

• @ref: 67770
• description: Rhodanobacter koreensis strain THG-DD7 16S ribosomal RNA gene, partial sequence
• accession: KF532124
• length: 1421
• database: nuccore
• NCBI tax ID: 1393054

GC content

• @ref: 67770
• GC-content: 65.2
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 19614, KACC 17650

literature

• topic: Phylogeny
• Pubmed-ID: 25604344
• title: Rhodanobacter koreensis sp. nov., a bacterium isolated from tomato rhizosphere.
• authors: Won K, Singh H, Ngo HTT, Son H, Kook M, Kim KY, Yi TH
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.000077
• year: 2015
• mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Lycopersicon esculentum/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Ubiquinone/chemistry, Xanthomonadaceae/*classification/genetics/isolation & purification
• topic2: Genetics

Reference