Strain identifier
BacDive ID: 162563
Type strain:
Species: Halarchaeum salinum
Strain history: H. Minegishi MH1-224-5.
NCBI tax ID(s): 489912 (species)
version 9.2 (current version)
General
@ref: 67770
BacDive-ID: 162563
keywords: 16S sequence, Archaea, thermophilic
description: Halarchaeum salinum JCM 19591 is a thermophilic archaeon that was isolated from Commercial solar salt produced in Japan.
NCBI tax id
- NCBI tax id: 489912
- Matching level: species
strain history
- @ref: 67770
- history: H. Minegishi MH1-224-5.
doi: 10.13145/bacdive162563.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Halobacteria
- order: Halobacteriales
- family: Halobacteriaceae
- genus: Halarchaeum
- species: Halarchaeum salinum
- full scientific name: Halarchaeum salinum Yamauchi et al. 2013
@ref: 67770
domain: Archaea
phylum: Euryarchaeota
class: Halobacteria
order: Halobacteriales
family: Halobacteriaceae
genus: Halarchaeum
species: Halarchaeum salinum
full scientific name: Halarchaeum salinum Yamauchi et al. 2013
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 40
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Commercial solar salt produced in Japan
taxonmaps
- @ref: 69479
- File name: preview.99_189060.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17659;96_68866;97_89513;98_121794;99_189060&stattab=map
- Last taxonomy: Halarchaeum salinum
- 16S sequence: AB693105
- Sequence Identity:
- Total samples: 2
- aquatic counts: 2
Sequence information
16S sequences
- @ref: 67770
- description: Halarchaeum salinum gene for 16S ribosomal RNA, partial sequence
- accession: AB693105
- length: 1474
- database: nuccore
- NCBI tax ID: 489912
GC content
- @ref: 67770
- GC-content: 61
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 19591
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |