Strain identifier

BacDive ID: 162563

Type strain: No

Species: Halarchaeum salinum

Strain history: H. Minegishi MH1-224-5.

NCBI tax ID(s): 489912 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
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General

@ref: 67770

BacDive-ID: 162563

keywords: 16S sequence, Archaea, thermophilic

description: Halarchaeum salinum JCM 19591 is a thermophilic archaeon that was isolated from Commercial solar salt produced in Japan.

NCBI tax id

  • NCBI tax id: 489912
  • Matching level: species

strain history

  • @ref: 67770
  • history: H. Minegishi MH1-224-5.

doi: 10.13145/bacdive162563.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Halobacteria
  • order: Halobacteriales
  • family: Halobacteriaceae
  • genus: Halarchaeum
  • species: Halarchaeum salinum
  • full scientific name: Halarchaeum salinum Yamauchi et al. 2013

@ref: 67770

domain: Archaea

phylum: Euryarchaeota

class: Halobacteria

order: Halobacteriales

family: Halobacteriaceae

genus: Halarchaeum

species: Halarchaeum salinum

full scientific name: Halarchaeum salinum Yamauchi et al. 2013

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 40

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Commercial solar salt produced in Japan

taxonmaps

  • @ref: 69479
  • File name: preview.99_189060.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17659;96_68866;97_89513;98_121794;99_189060&stattab=map
  • Last taxonomy: Halarchaeum salinum
  • 16S sequence: AB693105
  • Sequence Identity:
  • Total samples: 2
  • aquatic counts: 2

Sequence information

16S sequences

  • @ref: 67770
  • description: Halarchaeum salinum gene for 16S ribosomal RNA, partial sequence
  • accession: AB693105
  • length: 1474
  • database: nuccore
  • NCBI tax ID: 489912

GC content

  • @ref: 67770
  • GC-content: 61
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 19591

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/