Strain identifier
BacDive ID: 162543
Type strain: 
Species: Roseomonas wooponensis
Strain history: C. N. Seong WW53.
NCBI tax ID(s): 1428345 (species)
version 9.2 (current version)
General
@ref: 67770
BacDive-ID: 162543
keywords: 16S sequence, Bacteria, mesophilic
description: Roseomonas wooponensis JCM 19527 is a mesophilic bacterium that was isolated from Wetland freshwater.
NCBI tax id
- NCBI tax id: 1428345
- Matching level: species
strain history
- @ref: 67770
- history: C. N. Seong WW53.
doi: 10.13145/bacdive162543.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Acetobacteraceae
- genus: Roseomonas
- species: Roseomonas wooponensis
- full scientific name: Roseomonas wooponensis Lee et al. 2015
synonyms
- @ref: 20215
- synonym: Falsiroseomonas wooponensis
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Acetobacteraceae
genus: Roseomonas
species: Roseomonas wooponensis
full scientific name: Roseomonas wooponensis Lee et al. 2015
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-10
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Wetland freshwater
- geographic location: Woopo wetland
- country: Republic of Korea
- origin.country: KOR
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_97364.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_266;96_30947;97_50639;98_66708;99_97364&stattab=map
- Last taxonomy: Roseomonas wooponensis subclade
- 16S sequence: KF619243
- Sequence Identity:
- Total samples: 486
- soil counts: 230
- aquatic counts: 191
- animal counts: 38
- plant counts: 27
Sequence information
16S sequences
- @ref: 67770
- description: Falsiroseomonas wooponensis strain WW53 16S ribosomal RNA gene, partial sequence
- accession: KF619243
- length: 1425
- database: nuccore
- NCBI tax ID: 1428345
GC content
- @ref: 67770
- GC-content: 71
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 19527, KCTC 32534
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 26289445 | Roseomonas wooponensis sp. nov., isolated from wetland freshwater. | Lee JH, Kim MS, Baik KS, Kim HM, Lee KH, Seong CN | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000536 | 2015 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fresh Water/*microbiology, Methylobacteriaceae/*classification/genetics/isolation & purification, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, Spermidine/chemistry, Ubiquinone/chemistry, *Wetlands | Transcriptome |
| Phylogeny | 32886590 | Roseomonas bella sp. nov., isolated from lake sediment. | Zhang JY, Jiang XB, Zhu D, Wang XM, Du ZJ, Mu DS | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004436 | 2020 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Geologic Sediments/*microbiology, Lakes/*microbiology, Methylobacteriaceae/*classification/isolation & purification, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Transcriptome |
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |