Strain identifier

BacDive ID: 162459

Type strain: No

Species: Nonlabens ulvanivorans

Strain history: T. Sawabe NR27.

NCBI tax ID(s): 906888 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 162459

keywords: genome sequence, Bacteria, Gram-negative

description: Nonlabens ulvanivorans JCM 19275 is a Gram-negative bacterium that was isolated from Rock surface on the coat near Nanaehama.

NCBI tax id

  • NCBI tax id: 906888
  • Matching level: species

strain history

  • @ref: 67770
  • history: T. Sawabe NR27.

doi: 10.13145/bacdive162459.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Nonlabens
  • species: Nonlabens ulvanivorans
  • full scientific name: Nonlabens ulvanivorans (Barbeyron et al. 2011) Yi and Chun 2012
  • synonyms

    • @ref: 20215
    • synonym: Persicivirga ulvanivorans

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Nonlabens

species: Nonlabens ulvanivorans

full scientific name: Nonlabens ulvanivorans (Barbeyron et al. 2011) Yi and Chun 2012

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 97.783

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 30

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 96.43

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Rock surface on the coat near Nanaehama
  • geographic location: Hakodate
  • country: Japan
  • origin.country: JPN
  • continent: Asia

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Nonlabens ulvanivorans strain JCM19275906888.15wgspatric906888
66792Nonlabens ulvanivorans JCM 192752814123433draftimg906888
67770Nonlabens ulvanivorans JCM 19275GCA_000764815contigncbi906888

GC content

  • @ref: 67770
  • GC-content: 35.1
  • method: genome sequence analysis

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno89.267no
flagellatedno96.749no
gram-positiveno97.783no
anaerobicno99.309no
halophileno50.564no
spore-formingno96.43no
glucose-utilyes82.816no
aerobicyes90.641no
thermophileno99.023yes
glucose-fermentno89.77no

External links

@ref: 67770

culture collection no.: JCM 19275

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes