Strain identifier
BacDive ID: 162414
Type strain:
Species: Flavobacterium panacisoli
Strain history: D.-C. Yang and Y.-J. Kim DCY70.
NCBI tax ID(s): 1249629 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162414
keywords: 16S sequence, Bacteria, mesophilic
description: Flavobacterium panacisoli JCM 19162 is a mesophilic bacterium that was isolated from Soil of a ginseng field.
NCBI tax id
- NCBI tax id: 1249629
- Matching level: species
strain history
- @ref: 67770
- history: D.-C. Yang and Y.-J. Kim DCY70.
doi: 10.13145/bacdive162414.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Flavobacterium
- species: Flavobacterium panacisoli
- full scientific name: Flavobacterium panacisoli Jung et al. 2016
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Flavobacterium
species: Flavobacterium panacisoli
full scientific name: Flavobacterium panacisoli Jung et al.
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-6
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil of a ginseng field
- country: Republic of Korea
- origin.country: KOR
- continent: Asia
Sequence information
16S sequences
- @ref: 67770
- description: Flavobacterium panacisoli 16S ribosomal RNA gene, partial sequence
- accession: JX863366
- length: 1381
- database: ena
- NCBI tax ID: 1249629
GC content
- @ref: 67770
- GC-content: 34.9
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 19162, KCTC 32393
literature
- topic: Phylogeny
- Pubmed-ID: 27120464
- title: Flavobacterium panacisoli sp. nov., isolated from soil of a ginseng field.
- authors: Jung SY, Kim YJ, Hoang VA, Jin Y, Nguyen NL, Oh KH, Yang DC
- journal: Arch Microbiol
- DOI: 10.1007/s00203-016-1216-6
- year: 2016
- mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/*analysis, *Flavobacterium/classification/genetics/isolation & purification, Panax/microbiology, Phosphatidylethanolamines/*analysis, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, Soil Microbiology, Vitamin K 2/*analogs & derivatives/analysis
- topic2: Transcriptome
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |