Strain identifier
BacDive ID: 162182
Type strain: 
Species: Caballeronia humi
Strain history: S.-S. Lee RS-7.
NCBI tax ID(s): 36773 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162182
keywords: 16S sequence, Bacteria, mesophilic
description: Caballeronia humi JCM 18069 is a mesophilic bacterium that was isolated from Peat soil near a coal mine at Prokopyevsk.
NCBI tax id
- NCBI tax id: 36773
- Matching level: species
strain history
- @ref: 67770
- history: S.-S. Lee RS-7.
doi: 10.13145/bacdive162182.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Burkholderiaceae
- genus: Caballeronia
- species: Caballeronia humi
- full scientific name: Caballeronia humi (Vandamme et al. 2013) Dobritsa and Samadpour 2016
synonyms
@ref synonym 20215 Burkholderia humi 20215 Paraburkholderia humi
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Burkholderiaceae
genus: Burkholderia
species: Burkholderia sp.
full scientific name: Burkholderia sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Peat soil (pH 4.5) near a coal mine at Prokopyevsk
- geographic location: Kemerovo Oblast
- country: Russia
- origin.country: RUS
Sequence information
16S sequences
- @ref: 67770
- description: 'Burkholderia humi' Srinivasan et al. 2013 strain Rs7 16S ribosomal RNA gene, partial sequence
- accession: JQ692177
- length: 1434
- database: ena
- NCBI tax ID: 1189127
External links
@ref: 67770
culture collection no.: JCM 18069, KEMC 7302-068
literature
- topic: Phylogeny
- Pubmed-ID: 23196702
- title: Burkholderia humi sp. nov., isolated from peat soil.
- authors: Srinivasan S, Kim J, Kang SR, Jheong WH, Lee SS
- journal: Curr Microbiol
- DOI: 10.1007/s00284-012-0270-9
- year: 2012
- mesh: Base Composition, Burkholderia/classification/*isolation & purification/physiology, Fatty Acids/chemistry, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, *Soil Microbiology
- topic2: Genetics
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |